Gene Bphy_6565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6565 
Symbol 
ID6248102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1149218 
End bp1149703 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID642598237 
ProductUspA domain-containing protein 
Protein accessionYP_001862639 
Protein GI186471321 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.363872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.275495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA TACTCGTAGG TTATGACGGG TCGCCGTCCG CGCGTCATGC GGTGACGTTC 
GCCGTCGATC TCGCCAGGCG CTTCGATGCA CGTCTGCATG TGCTCGTCGT CGCGCGCGCG
CCGGACTGGG GCGCGATCGA GCTGGAAAGA AGGGAAATGG TCGACTATGA GCTGCGTCAC
GCGAACGAAG TGCTCGACGA AGTGAAGGCC AGACTCGCGT CGTCGAATGA ATATCCCGCC
TTCGATCTCG TGATCGGGCA GCCGGCGAAA GAGATTGTGC TCTACGCAGA GCAGCACGAT
ATCGATCATC TCGTCGTGGG CCATCGCGGC CACACGCCGT TCGACCGCTG GCTGATCGGC
TCGGTGGCGC GCCAGGTGCT CGCCTATGCG CCGTGCGCCG TGACGATCGT GCGCGACCCG
TCGACGATGA AAAAGCGTCA GGCGAAATCG GGGCAGCACG CCGCCGACGA AAGGCCGCTA
GTCTGA
 
Protein sequence
MQNILVGYDG SPSARHAVTF AVDLARRFDA RLHVLVVARA PDWGAIELER REMVDYELRH 
ANEVLDEVKA RLASSNEYPA FDLVIGQPAK EIVLYAEQHD IDHLVVGHRG HTPFDRWLIG
SVARQVLAYA PCAVTIVRDP STMKKRQAKS GQHAADERPL V