| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6552 |
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| Symbol | |
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| ID | 6248089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1136103 |
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| End bp | 1137323 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642598224 |
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| Product | porin |
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| Protein accession | YP_001862626 |
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| Protein GI | 186471308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.961428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGA GTACCAGCAG CGCAAAGGCA GTTGTCATCG GGGCTGCCCT CGTCGGCTGC
GCGCCGGCAT TCGCGCAAAG CAGCGTCACG CTTTACGGCA TCGTCGATAA CGGGCTCGCT
TACCAGAGCA GCTCGACGTC GCTGGGCTCA ACGAGCGGCG GACACTCGGT CGTCAAGATG
ACACCGGGCG TGTGGGCGGG CAGCCGCTTC GGCTTGAAGG GCGGCGAGGA TCTCGGCGGT
GGCACCCGAG CGATCTTCCA GCTCGAATCG GGCTTGAATT CCGCGACGGG CGCGGCTCAG
TACACCAACG CGCTGTTCGG CCGCCTTGCG TATGTCGGCG TCACGAATCC GGCCTACGGT
ACGTTCACTG CGGGCCGCCA GTACGCGTCG TATTATCAGT TGCTGTCGCC GTACAGCCCG
ACTACATGGA TCACGGGCTT CTATGGCGCG CACCCTGGGG ATATCGACGG TCTGGACACG
ATCTACCGCG CGAACAACAC GCTCGAATAC ACTTCGCCGA AGTTGTACGG GCTCACCGTG
AGCGGGTCGT ATTCGCTCGC GGGCGTGGCA GGCAGCGTAA GCCAGGGCTC GACGTGGACG
ACGGCCGTCC AGTACGCAAT GGGTCCCATC GGCCTGGCAG TCGGCTTTTC GCGCATCAAC
AACTCGACCT CGGGCGGCGG CGCGTGGGGT TCGGATTCGA CGACGTCGAA CGGCGGCTCG
CAGATCGGCG TATCGGCGTT GACGAACGGC TACCAGACCG CGCGTGCGCA ACAGCGCTTC
GCTGTAGGCG GCGGCTACAC GTTCAACAGC GCGTGGGATG TCACGGCGAC GTACTCCAAT
GTGCAGTACA TCCCCGGCAT CAATTCGAAG TTCACCGATA CGGCGATCTT CAATACAGGT
GGCGTCGTGC TGCACTGGAA GCCGGTAACG GTGTGGGATC TTGCTGCGGG TTACAGCTAC
ACGCGCGCCA CGCAGGCGAA CGGCATCAAG GATAGCGCGA CGTATCAGCA GTTCAATCTC
TCGCAGTACT ACGCGCTGTC CAAGCGGACG GGCCTTTATG CGCTCGAAGC CTATCAACGC
GCAAACGGCA AGACGCTCGG CACGAACGGC TCGAGCCAGA TCATCGAAGC GACCGCGACG
ATCGGCGATG GCTTCAATAC GACGCCGTCG TCGACGGGCA GCCAGTTCGC GTTTGGCCTC
GGCGTCATTC ACCGCTTCTG A
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| Protein sequence | MKRSTSSAKA VVIGAALVGC APAFAQSSVT LYGIVDNGLA YQSSSTSLGS TSGGHSVVKM
TPGVWAGSRF GLKGGEDLGG GTRAIFQLES GLNSATGAAQ YTNALFGRLA YVGVTNPAYG
TFTAGRQYAS YYQLLSPYSP TTWITGFYGA HPGDIDGLDT IYRANNTLEY TSPKLYGLTV
SGSYSLAGVA GSVSQGSTWT TAVQYAMGPI GLAVGFSRIN NSTSGGGAWG SDSTTSNGGS
QIGVSALTNG YQTARAQQRF AVGGGYTFNS AWDVTATYSN VQYIPGINSK FTDTAIFNTG
GVVLHWKPVT VWDLAAGYSY TRATQANGIK DSATYQQFNL SQYYALSKRT GLYALEAYQR
ANGKTLGTNG SSQIIEATAT IGDGFNTTPS STGSQFAFGL GVIHRF
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