| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6538 |
|---|
| Symbol | |
|---|
| ID | 6248075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1120435 |
|---|
| End bp | 1121649 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642598210 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001862612 |
|---|
| Protein GI | 186471294 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.499845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACA CAGCCATTGA AGTATCGGCG GCACCTGTCT TCAACATCGC ACGCGGCACG
TTAGCGGGTG CGAGCGCGAG CCTTGTCGGC ATCGGGCTCG CGCGCTTCGC TTACACGCCG
CTGCTTCCCG CCATCATCGA CGCGCACTGG TTCGCGGCAT CGACGGCAGC CTATCTCGGC
GCGGCGAACC TGGGCGGCTA TCTGGCAGGC GCGCTGCTCG GGGGCTACCT CGCGAAGCGC
GCCAATGCAG CGACGGTACT GCGCGCAATG ATGTTGCTGG CGACGATCGC ATTTATCGCT
TGCGCATTCC CGTTGTCGTT CGTGTGGTTC TTCGTGTGGC GTTTCGCATC GGGCCTGTCG
GGCGGCACGT TGATGGTGCT GGCCGCACCG ACCGTGCTCG CCCATGTGCC GCCATCGCGC
CGCGGTCTGG TGAGCGGCGC GATCTTCGCG GGCATCGGTC TTGGCATCGC TGCATCGGGC
ACGATCGTGC CGCTGCTGCT GCGTGAAGGC GTGGCCCAGG CGTGGTTCGG ACTCGGCACG
ATCGCGCTGC TGTTGACGCT CGCCGCATGG AACGGCTGGC CGAAGCACGA TGCGCCCGCG
CCCTCCGCGC ACAAGCACCA CTCACAGCAT GCGAAACCAG GCGGCTTTAC GCTGCGCGCG
CTCTATGCGG AGTACGCGCT GAACGCGGTC GGCCTCGTGC CGCACATGCT GTTTCTCGTC
GACTTCGTAT CTCGCGGGCT CGGCAAGGGA CTGAATACCG GCGCGCAATA CTGGGTGCTC
TTCGGGCTTG CTGCGATTGC GGGCCCGCTG CTCAGCGGAC ATCTCGCCGA CCGCGCTGGC
TTTGCATCTG CGCTGCGCGC GGCATTCGTG ATCCAGATCG TCGCTGTCGC GTTGCCTCTG
ATCGACACGA GTCCTGTACC GCTGATCGCC TCCAGCGTGC TGATGGGCGC AGCCGTGCCG
GGTATCGTGC CGCTCGCGCT TGGCCGCGTC AATGAACTGC TCGCGCATCA CCCGGCCGCG
CAGAAAGGTG CGTGGAGCAC GGCCACCACG ACATTCGCCG TGTTGCAGGC GGTCGCCGCG
TATGGCATGT CGTTTCTTTT CACGCAAAAC GGCGGCAATT ACGCCATGTT GTTCGTGATC
GGCGCAGCGG CGCTCGCACT CGCACTGGCC GTCGACCTGT TCGCTGCGCT GCGCGCCCAC
CCGCAAAAGG TTTGA
|
|---|
| Protein sequence | MQHTAIEVSA APVFNIARGT LAGASASLVG IGLARFAYTP LLPAIIDAHW FAASTAAYLG
AANLGGYLAG ALLGGYLAKR ANAATVLRAM MLLATIAFIA CAFPLSFVWF FVWRFASGLS
GGTLMVLAAP TVLAHVPPSR RGLVSGAIFA GIGLGIAASG TIVPLLLREG VAQAWFGLGT
IALLLTLAAW NGWPKHDAPA PSAHKHHSQH AKPGGFTLRA LYAEYALNAV GLVPHMLFLV
DFVSRGLGKG LNTGAQYWVL FGLAAIAGPL LSGHLADRAG FASALRAAFV IQIVAVALPL
IDTSPVPLIA SSVLMGAAVP GIVPLALGRV NELLAHHPAA QKGAWSTATT TFAVLQAVAA
YGMSFLFTQN GGNYAMLFVI GAAALALALA VDLFAALRAH PQKV
|
|---|
| |