Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6531 |
Symbol | |
ID | 6248068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 1113642 |
End bp | 1114559 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642598203 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_001862605 |
Protein GI | 186471287 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0893919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.142305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC CACAAGAACT GAAATCGATC GTATCCGAAG GCCTTTTGTC GTTCCCCGTC ACCGACTTCG ACAACAACGG CAACTTCCGC GCCGACACGT ATGCGGCACG TCTCGAATGG CTTGCGCCGT ATGGCGCGAC GGCGCTGTTC GCGGCGGGCG GCACGGGCGA ATTTTTCTCG CTGACGAAGT CCGACTATAC GAACGTGATC CGCACCGCTA CGGAAACCTG CAAGGGCAAG GTGCCGATTC TCGCCGGCGC GGGCGGCCCG ACGCGCGTCG CTATCGAATA TGCGCAGGAA GCCGAGCGCA ACGGCGCGCA CGGCATTCTG CTGATGCCGC ACTATCTGAC GGAAGCATCG CAGGAGGGTA TCGCCGCGCA CGCCGAGGAA GTATGCAAGG CCGTTCCGGA CATGGGCGTG ATCATTTACA ACCGCGCCAA TTCGAAGCTC AATGCCGATT CGCTCGAGCG TCTTGCCGAC AAGTGTCCGA ACCTGATCGG CTTCAAGGAT GGCGTGGGCG ACATCGAGAG CATGGTGACG ATTCGCCGTC GCATGGGCGA TCGGTTCTCG TATCTCGGCG GCCTGCCGAC GGCTGAAGTG TATGCCGCTG CGTATAAGGC ACTAGGGGTG CCGGTGTATT CGTCGGCTGT ATTCAACTTC ATTCCTAAAA CGGCGATGGA GTTCTATCGC GCCATTGCTG CTGATGATCG GGCTACTACC GAGCGGTTGA TCGATGAGTT CTTTTTGCCG TATCTGGCAA TACGGAATCG CCGTGCGGGC TATGCCGTGA GTATTGTCAA GGCTGGCGCC AGGCTCGTCG GGCATGATGC GGGGCCTGTG CGGGCCCCGT TGACCGATCT TACCGAGGAT GAACTCGCCG AGCTGGATGT GCTGATCAAG AAGCTTGGCG CACAGTAA
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Protein sequence | MTTPQELKSI VSEGLLSFPV TDFDNNGNFR ADTYAARLEW LAPYGATALF AAGGTGEFFS LTKSDYTNVI RTATETCKGK VPILAGAGGP TRVAIEYAQE AERNGAHGIL LMPHYLTEAS QEGIAAHAEE VCKAVPDMGV IIYNRANSKL NADSLERLAD KCPNLIGFKD GVGDIESMVT IRRRMGDRFS YLGGLPTAEV YAAAYKALGV PVYSSAVFNF IPKTAMEFYR AIAADDRATT ERLIDEFFLP YLAIRNRRAG YAVSIVKAGA RLVGHDAGPV RAPLTDLTED ELAELDVLIK KLGAQ
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