| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6520 |
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| Symbol | |
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| ID | 6248057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1098915 |
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| End bp | 1100417 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642598192 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001862594 |
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| Protein GI | 186471276 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.128206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACGC TCATCCATGC CGCGCGACTG CGCACATGCG GCTCCATCGC TGTGGCGGCG
GCACTGTGCG CGTGCACGGT CGGCCCCGAC TATCAGACGC CGCTGACGGA CGCGCCGCCC
GCGTGGCATA CGGATTCTTA CTGGCGTCTC GCGCAGCCCT CGCATGCGCC GCTTGCGCCC
GACTGGTGGA AGGCGTTCGG CGACGCCACG CTCGATCGCC TCGAAACGCA GGCGCTCGCG
CAAAACCAGA CGCTCGTCGC GGCCAGCGCG CACTACGCAC AGGCGCGCGC GACGCTGGCC
AACACGCGCG CCCAGCTGAT TCCCGAAGTC GATCTGTCGG CGTCGGCGGC GCGCGAGCGG
GTCTCGAAGA ACCGGCCCGT GACGAACTAC GCGGTGCCGA ATCAGTCGAC GGTGCAGAAC
AATCTTCAGA TCGGCCCGAC GATCAACTAT GACGTCGATC TGTTCGGCCG CATTCGGCGT
GATGTCGAAG GCGCGCAGGC GTCTGCGGAA CAGTCGCGCG ACGATCTCGC GAATGCGCGG
CTCGTGCTGA CCACCGACGT CGCCACCGAC TATTTCTCGC TACGCGAACT CGATGCCGAG
ATCGACGTGT TGAACCGCTC GGTGCAGTTG CAACAGAAAG CGCTCGACTA TGTGACGACG
GAGCACGATC TCGGCTCCGT GTCAGGGCTC GACGTATTGC AGCAGAAGTC TCTGCTCGAT
CAGACGCGCG TGCAGGCGCA GCTTCTCGTC ACGCAGCGGG CACAGTTCGA GCATGCGATC
GCGGCGCTCG TGGCCGTGCC CGCGCCGCAG TTTTCGATCG AATCGCAAGT GGTCGAGTAT
CCCGTGCCTG CCATCCCCCT CGGTTTGCCG AGCGATCTGT TGCAGCGGCG GCCGGACGTC
GCGTCGGCGG AACGCGCGAT GGCGTCGGCG AATGCGCAGA TCGGCGTCGC GAAGGCGGCG
TTCTTTCCAA GCCTGACGTT GACGCCGGGC ATCGGCTGGC AGAGCACGGA ATTCGCGAAT
CTCCTGAGCG CTCCCAGCCT GATGTGGTCG CTCGGCGCCG CGCTCAGTCA GGTCGTGTTC
GACGGCGGCC GCCGCGCCGC CAATGTCGAT TTCGCCAACC AGGGCTACCA GGCAGCGCAG
GCCAACTACC GGCAGGCCGT CCTGACGGCG TTCCAGCAGG TGCAGGACGG CATCACCGGG
CTGTCCGTGC TCGACCGCGC GGCGTCGCAG TCGCACGATG CCGTCGCCGA TGCACAGCGG
CTGTTGACGC TCGCGAACGA TCGCTATTCG GGCGGACTTG TCGCCTATCT CGACGTGATC
ACCGCGCAGC AGTCGCTGCT GACGAGCGAG CGCCAGGACG TGCAGATTCA CGGTCAGCAG
ATGACGACGT CCGTTGCGCT CGTGAAGGCA CTGGGCGGCG GCTGGGACGT GCAGGAATCG
ACCGCGCAGG CCGATGTCGT CAAGGAACCC GCGAACGAAG TCGTGAAAGC AGAACTGAGA
TGA
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| Protein sequence | MNTLIHAARL RTCGSIAVAA ALCACTVGPD YQTPLTDAPP AWHTDSYWRL AQPSHAPLAP
DWWKAFGDAT LDRLETQALA QNQTLVAASA HYAQARATLA NTRAQLIPEV DLSASAARER
VSKNRPVTNY AVPNQSTVQN NLQIGPTINY DVDLFGRIRR DVEGAQASAE QSRDDLANAR
LVLTTDVATD YFSLRELDAE IDVLNRSVQL QQKALDYVTT EHDLGSVSGL DVLQQKSLLD
QTRVQAQLLV TQRAQFEHAI AALVAVPAPQ FSIESQVVEY PVPAIPLGLP SDLLQRRPDV
ASAERAMASA NAQIGVAKAA FFPSLTLTPG IGWQSTEFAN LLSAPSLMWS LGAALSQVVF
DGGRRAANVD FANQGYQAAQ ANYRQAVLTA FQQVQDGITG LSVLDRAASQ SHDAVADAQR
LLTLANDRYS GGLVAYLDVI TAQQSLLTSE RQDVQIHGQQ MTTSVALVKA LGGGWDVQES
TAQADVVKEP ANEVVKAELR
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