| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6515 |
|---|
| Symbol | |
|---|
| ID | 6248799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1094474 |
|---|
| End bp | 1095631 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642598187 |
|---|
| Product | YVTN beta-propeller repeat-containing protein |
|---|
| Protein accession | YP_001862589 |
|---|
| Protein GI | 186471271 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.761865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0861969 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTGCA CTATCGGACA TACCCGCAGA CTCGCACGCG TGGCGGCCAC CGTCGCGCTC
GCCGTTCTGC TCGGCGCGTG TGCCGGCCAG GCGACGGCGG CCGCCGTCGC GTACGTCACG
AGCGAGACGA ACGGCGTCGG CGTGATCGAT CTCGACCAGA TGACGCTCAC CAGAACGATC
GGCCTCGGCA AGGACGGACC GCGCGGCTTG AGCCTCACGG CGGACGGCCA CCGGCTGCTG
GTCGCGAACA AGACGGGCGA CCTCTCGGTA ATCGACACGT CGACCGACAA GGTGGTCGCG
CGCGTGAGGA TCGGCAAAAA CCCGGAGTTC GTGCGCGTGC ATCATGGCTT CGCATATGTC
ACGTACGAGC CGGGCGAAAG CGGTCCGCCG CCCCAGGCTG CTAATCAGGG TGCGAAACAG
GGTGCGGGCA AGCCTGAAAG CATGACCGGG GGCAAACCTG AAACCGAAGC CGCGGACGCC
AAGGGCGGCA AGGGCGGCCA TGACGACGAC GCGAACAGTC CGCCTGCCGA AGTCGCGATC
GTCGATTTGA AGACGATGAA GGTGGTGCGC TCGGTGAAGA GCGGCCATGA AACGGAGGGC
GTCGAATTTT CGCCGGACGG GCGCGAACTG CTGGTGACGA ACGAGGGCGA CGATACCGTT
TCGGTGTATC GGACGGGCAC GGGAAAGCCG GTGCGCACCG CGAAGCTGGA CAGGGGCTCG
CGGCCGCGCG GCATCAAGGC ATCGCCGGAC GGCAAGCAAT ACGTGGTGAC GTTGGAGAAC
ACCAACAAGT TCGTCGTGCT CGATGCAGGG ACGCTCGAGC CGGTGAAGAC AGTCGACACG
AAGATGGGAC CGTACGGCGT CGCGTTCGAT CCGTCGGGCA AGCATCTGCT CGTCGCGGCC
GCGCGCGACA AGACCTTGCA GGTGTTCGAT GCGAAGACCT ACGAGCATGT GGCCGACGCG
CCCGTCGGTC AGCGCTGCTG GCATTTCAGC TTCACGCCCG ATGGCTCGAA GGTGCTGATG
GCGTGCGGCC GCTCGAATGC GGTTTTCGTG CTGGACGCGA ACAACCGCTA TCAGACGGTC
AGCCAGATCG GGGATCTGCC GCTGGCATGG GGCATTGTCA CGTCGCCGCC TAGCCAGGGG
TCGATCGAAT CGCGCTAG
|
|---|
| Protein sequence | MHCTIGHTRR LARVAATVAL AVLLGACAGQ ATAAAVAYVT SETNGVGVID LDQMTLTRTI
GLGKDGPRGL SLTADGHRLL VANKTGDLSV IDTSTDKVVA RVRIGKNPEF VRVHHGFAYV
TYEPGESGPP PQAANQGAKQ GAGKPESMTG GKPETEAADA KGGKGGHDDD ANSPPAEVAI
VDLKTMKVVR SVKSGHETEG VEFSPDGREL LVTNEGDDTV SVYRTGTGKP VRTAKLDRGS
RPRGIKASPD GKQYVVTLEN TNKFVVLDAG TLEPVKTVDT KMGPYGVAFD PSGKHLLVAA
ARDKTLQVFD AKTYEHVADA PVGQRCWHFS FTPDGSKVLM ACGRSNAVFV LDANNRYQTV
SQIGDLPLAW GIVTSPPSQG SIESR
|
|---|
| |