Gene Bphy_6471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6471 
Symbol 
ID6248010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1052077 
End bp1054155 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content64% 
IMG OID642598145 
Productcarbon starvation protein CstA 
Protein accessionYP_001862547 
Protein GI186471229 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.333661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGG CTTCCTCGAT TCTGGTCTGG ATAGCGGTCG CGCTGCTCGG CGCGTTCGCG 
TTCGGCACCA TCGCGCTCGC GCATGGCGAA AAGGTCAGTG CCCTCTGGGT CGTGATCGCC
GCCGTCTGCG TCTATCTGAT CGCTTACCGC TTTTATAGCC GTTTCATCGC TAATCATGTG
CTGCGGCTCG ACGGCCAGCG CGTGACGCCT GCCGCGCGTC ACAACGACGG CCTCGACTAT
GTGCCGACCA ACAAATACGT ACTGTTCGGC CATCATTTCG CGGCGATCGC AGGCGCCGGC
CCGCTGGTCG GCCCGGTGCT CGCCGCGCAG ATGGGCTATG TGCCCGGCAT GCTGTGGATC
CTCGCGGGCG TCGTGTTCGC GGGCGCCGTG CAGGACTTCA TCGTGCTCTT CATCTCGACG
CGCCGCGACG GCCGCTCGCT CGGCGATCTC GTGAAGATGG AACTCGGCAC CGTACCGGGC
GTGATTGCCC TGTTCGGCGC GTTCCTCATC ATGGTGATCA TCCTGGCCGT GCTCGCGCTG
ATCGTCGTGA AGGCGCTGAC CAATTCGCCG TGGGGCACCT TTACGGTTGC TGCGACGATT
CCGATTGCGC TCTTCATGGG CGTCTATACG CGCTACATCC GTCCGGGTCG CATCGGCGAA
GTGTCGATCA TCGGCTTCGT GCTGCTGATG GCGTCGATCG TGTTCGGTCA GAGCGTGCAT
GATTCCCCGA CGCTCGCCGC ATGGTTCACG TTCAACGGCA CGCAGCTCAC GTGGATTCTG
ATCGGCTATG GCTTTGTCGC GTCGGTGCTG CCCGTGTGGC TGCTGCTTGC GCCGCGCGAT
TACCTGTCGA CATTCCTGAA GATCGGCACG ATTCTCGGCC TCGCGATCGG CATCCTCGTC
GTCGCGCCGG AACTGAAGAT GCCTGCGCTG ACGAAGTTCG TGGACGGCAC GGGTCCCGTC
TGGTCGGGCA ACCTGTTCCC GTTCCTGTTC ATCACGATCG CGTGCGGCGC GGTGTCGGGC
TTCCATGCGC TGATCTCGTC GGGCACGACG CCGAAGCTGC TCGACAACGA AACCAACGCG
CGCTTCATCG GTTACGGCGC GATGCTGATG GAATCGTTCG TCGCGATCAT GGCGCTGGTC
GCCGCCGCCG TGATCGAACC GGGCGTGTAC TTCGCGATGA ACGCGCCCGC CGCCGTGCTC
GGCGCGACGC CTGACGCCGT TGCGCAGACG GTGTCGCAAT GGGGCTTCGT GCTGACGCCG
GAAATGCTGA CGCAAACCGC GAAGGCCGTC GGCGAGACGA CGATCGTCGC GCGTGCAGGC
GGTGCGCCGA CGCTGGCCGT AGGCATGGCG CAGATTCTCC ATCAGGTGAT CGGCGGCGAA
GCGATGATGG CGTTCTGGTA TCACTTCGCG ATCCTGTTCG AGGCGCTCTT CATCCTGACA
GCCGTCGATG CGGGCACGCG CGCCGGACGC TTCATGCTGC AAGACCTGCT CGGCACCTTC
CACCCGGCTC TCAAGCGCAC GGAATCGCTG CCTGCGAACC TGATCGCGAC GGCGCTGTGC
GTGGCGGCGT GGGGCTACTT TCTGTATCAG GGCGTGGTGG ATCCGCTTGG CGGGATCAAT
ACGCTGTGGC CGCTATTCGG AATTTCGAAT CAGATGCTGG CGGGTATCGC GCTGGTGCTC
GGCACGGTGG TGCTGTTCAA GATGAAGCGC GAGCGCTTCG CGTGGGTGAC GCTCGTGCCG
ACCGTGTGGC TGCTGATCTG CACGATGACG GCCGGGTGGC AGAAGATTTT CGATGCGAAT
CCGAAGGTGG GTTTTCTTGC ACATGCCGCG AAGCTCGGCG CTGCCGCCGA TGCAGGCAAG
GTCGTTGCGC CGGCGAAATC GATCGAGCAG ATGCATCGGA TCATGTTCAA CGACTACGTC
GATGCAGCGC TTGCCGGGCT GTTCATTTTC GTCGTTGTCA GCGTCGTTGT GTATGGCGTT
CTCGCGGTGT TGCGCGCGCG TCGCGCGACG TCGCCTACTG TGCGCGAGAC GCCGTTCGAA
GTGTTGCCCG GTGCGTCGCG CGCCGGCGGC GCACAGTGA
 
Protein sequence
MNRASSILVW IAVALLGAFA FGTIALAHGE KVSALWVVIA AVCVYLIAYR FYSRFIANHV 
LRLDGQRVTP AARHNDGLDY VPTNKYVLFG HHFAAIAGAG PLVGPVLAAQ MGYVPGMLWI
LAGVVFAGAV QDFIVLFIST RRDGRSLGDL VKMELGTVPG VIALFGAFLI MVIILAVLAL
IVVKALTNSP WGTFTVAATI PIALFMGVYT RYIRPGRIGE VSIIGFVLLM ASIVFGQSVH
DSPTLAAWFT FNGTQLTWIL IGYGFVASVL PVWLLLAPRD YLSTFLKIGT ILGLAIGILV
VAPELKMPAL TKFVDGTGPV WSGNLFPFLF ITIACGAVSG FHALISSGTT PKLLDNETNA
RFIGYGAMLM ESFVAIMALV AAAVIEPGVY FAMNAPAAVL GATPDAVAQT VSQWGFVLTP
EMLTQTAKAV GETTIVARAG GAPTLAVGMA QILHQVIGGE AMMAFWYHFA ILFEALFILT
AVDAGTRAGR FMLQDLLGTF HPALKRTESL PANLIATALC VAAWGYFLYQ GVVDPLGGIN
TLWPLFGISN QMLAGIALVL GTVVLFKMKR ERFAWVTLVP TVWLLICTMT AGWQKIFDAN
PKVGFLAHAA KLGAAADAGK VVAPAKSIEQ MHRIMFNDYV DAALAGLFIF VVVSVVVYGV
LAVLRARRAT SPTVRETPFE VLPGASRAGG AQ