Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6471 |
Symbol | |
ID | 6248010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 1052077 |
End bp | 1054155 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642598145 |
Product | carbon starvation protein CstA |
Protein accession | YP_001862547 |
Protein GI | 186471229 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.333661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGG CTTCCTCGAT TCTGGTCTGG ATAGCGGTCG CGCTGCTCGG CGCGTTCGCG TTCGGCACCA TCGCGCTCGC GCATGGCGAA AAGGTCAGTG CCCTCTGGGT CGTGATCGCC GCCGTCTGCG TCTATCTGAT CGCTTACCGC TTTTATAGCC GTTTCATCGC TAATCATGTG CTGCGGCTCG ACGGCCAGCG CGTGACGCCT GCCGCGCGTC ACAACGACGG CCTCGACTAT GTGCCGACCA ACAAATACGT ACTGTTCGGC CATCATTTCG CGGCGATCGC AGGCGCCGGC CCGCTGGTCG GCCCGGTGCT CGCCGCGCAG ATGGGCTATG TGCCCGGCAT GCTGTGGATC CTCGCGGGCG TCGTGTTCGC GGGCGCCGTG CAGGACTTCA TCGTGCTCTT CATCTCGACG CGCCGCGACG GCCGCTCGCT CGGCGATCTC GTGAAGATGG AACTCGGCAC CGTACCGGGC GTGATTGCCC TGTTCGGCGC GTTCCTCATC ATGGTGATCA TCCTGGCCGT GCTCGCGCTG ATCGTCGTGA AGGCGCTGAC CAATTCGCCG TGGGGCACCT TTACGGTTGC TGCGACGATT CCGATTGCGC TCTTCATGGG CGTCTATACG CGCTACATCC GTCCGGGTCG CATCGGCGAA GTGTCGATCA TCGGCTTCGT GCTGCTGATG GCGTCGATCG TGTTCGGTCA GAGCGTGCAT GATTCCCCGA CGCTCGCCGC ATGGTTCACG TTCAACGGCA CGCAGCTCAC GTGGATTCTG ATCGGCTATG GCTTTGTCGC GTCGGTGCTG CCCGTGTGGC TGCTGCTTGC GCCGCGCGAT TACCTGTCGA CATTCCTGAA GATCGGCACG ATTCTCGGCC TCGCGATCGG CATCCTCGTC GTCGCGCCGG AACTGAAGAT GCCTGCGCTG ACGAAGTTCG TGGACGGCAC GGGTCCCGTC TGGTCGGGCA ACCTGTTCCC GTTCCTGTTC ATCACGATCG CGTGCGGCGC GGTGTCGGGC TTCCATGCGC TGATCTCGTC GGGCACGACG CCGAAGCTGC TCGACAACGA AACCAACGCG CGCTTCATCG GTTACGGCGC GATGCTGATG GAATCGTTCG TCGCGATCAT GGCGCTGGTC GCCGCCGCCG TGATCGAACC GGGCGTGTAC TTCGCGATGA ACGCGCCCGC CGCCGTGCTC GGCGCGACGC CTGACGCCGT TGCGCAGACG GTGTCGCAAT GGGGCTTCGT GCTGACGCCG GAAATGCTGA CGCAAACCGC GAAGGCCGTC GGCGAGACGA CGATCGTCGC GCGTGCAGGC GGTGCGCCGA CGCTGGCCGT AGGCATGGCG CAGATTCTCC ATCAGGTGAT CGGCGGCGAA GCGATGATGG CGTTCTGGTA TCACTTCGCG ATCCTGTTCG AGGCGCTCTT CATCCTGACA GCCGTCGATG CGGGCACGCG CGCCGGACGC TTCATGCTGC AAGACCTGCT CGGCACCTTC CACCCGGCTC TCAAGCGCAC GGAATCGCTG CCTGCGAACC TGATCGCGAC GGCGCTGTGC GTGGCGGCGT GGGGCTACTT TCTGTATCAG GGCGTGGTGG ATCCGCTTGG CGGGATCAAT ACGCTGTGGC CGCTATTCGG AATTTCGAAT CAGATGCTGG CGGGTATCGC GCTGGTGCTC GGCACGGTGG TGCTGTTCAA GATGAAGCGC GAGCGCTTCG CGTGGGTGAC GCTCGTGCCG ACCGTGTGGC TGCTGATCTG CACGATGACG GCCGGGTGGC AGAAGATTTT CGATGCGAAT CCGAAGGTGG GTTTTCTTGC ACATGCCGCG AAGCTCGGCG CTGCCGCCGA TGCAGGCAAG GTCGTTGCGC CGGCGAAATC GATCGAGCAG ATGCATCGGA TCATGTTCAA CGACTACGTC GATGCAGCGC TTGCCGGGCT GTTCATTTTC GTCGTTGTCA GCGTCGTTGT GTATGGCGTT CTCGCGGTGT TGCGCGCGCG TCGCGCGACG TCGCCTACTG TGCGCGAGAC GCCGTTCGAA GTGTTGCCCG GTGCGTCGCG CGCCGGCGGC GCACAGTGA
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Protein sequence | MNRASSILVW IAVALLGAFA FGTIALAHGE KVSALWVVIA AVCVYLIAYR FYSRFIANHV LRLDGQRVTP AARHNDGLDY VPTNKYVLFG HHFAAIAGAG PLVGPVLAAQ MGYVPGMLWI LAGVVFAGAV QDFIVLFIST RRDGRSLGDL VKMELGTVPG VIALFGAFLI MVIILAVLAL IVVKALTNSP WGTFTVAATI PIALFMGVYT RYIRPGRIGE VSIIGFVLLM ASIVFGQSVH DSPTLAAWFT FNGTQLTWIL IGYGFVASVL PVWLLLAPRD YLSTFLKIGT ILGLAIGILV VAPELKMPAL TKFVDGTGPV WSGNLFPFLF ITIACGAVSG FHALISSGTT PKLLDNETNA RFIGYGAMLM ESFVAIMALV AAAVIEPGVY FAMNAPAAVL GATPDAVAQT VSQWGFVLTP EMLTQTAKAV GETTIVARAG GAPTLAVGMA QILHQVIGGE AMMAFWYHFA ILFEALFILT AVDAGTRAGR FMLQDLLGTF HPALKRTESL PANLIATALC VAAWGYFLYQ GVVDPLGGIN TLWPLFGISN QMLAGIALVL GTVVLFKMKR ERFAWVTLVP TVWLLICTMT AGWQKIFDAN PKVGFLAHAA KLGAAADAGK VVAPAKSIEQ MHRIMFNDYV DAALAGLFIF VVVSVVVYGV LAVLRARRAT SPTVRETPFE VLPGASRAGG AQ
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