Gene Bphy_6461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6461 
Symbol 
ID6248000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1042884 
End bp1043516 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID642598135 
Producthypothetical protein 
Protein accessionYP_001862537 
Protein GI186471219 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0507888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.43229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACC GCCAGATTCC CGCCATCTTT GTGGCTGACG CACCCGGCCT CGACTTCCTG 
AATTCGGTTG CGACGCTGGT CGACGAGCCC GTCGACTCGA TCGTCGACGG CGAAGGCCTG
CTCCGCTGGC TGTCGCAGGC GGGCATGGTT CCGCCCGGCG CGCTCGCCGG GATCCGCGAG
CGCTCGACGC CGGAGCAGCT CGACGCGATC GCCGCGCAGG CGCGCGGGCT GCGCGAGTGG
TTTCGCGGCT ATGTGAAGGC CAGGAAAGGG CGCGCGCTGG CGGCAAGCGA TCTGCGCGAC
CTGGCGCCGT TGAACCAGCT GCTCGCGCGT GACGTGCAGC ATCGTGAGAT CGTCGCAGGC
GGGCCCGGCG ACGCGGGCGT GTTTTTATTG CGCGCGACGC GGCGCTGGGA GTCGGCGGAG
TCGTTGTTGA TGCCGATCGC CGAGGCACTG GCGAAACTCG TCTGTGAGGA GGACTTCACG
CACGTGAAAG CGTGCGAAGG GCCGAAATGC ACGCTGCTGT TCGCCGATCA TACGCGCGGT
CACGCGCGCA GATGGTGCAG CATGGCGATC TGCGGCAATC GCGCGAAGGT GGCGGCGCAT
CGCGCGAGGC TCAAGCAAAA AAAGGTGAGC TAG
 
Protein sequence
MDYRQIPAIF VADAPGLDFL NSVATLVDEP VDSIVDGEGL LRWLSQAGMV PPGALAGIRE 
RSTPEQLDAI AAQARGLREW FRGYVKARKG RALAASDLRD LAPLNQLLAR DVQHREIVAG
GPGDAGVFLL RATRRWESAE SLLMPIAEAL AKLVCEEDFT HVKACEGPKC TLLFADHTRG
HARRWCSMAI CGNRAKVAAH RARLKQKKVS