| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6455 |
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| Symbol | |
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| ID | 6247994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1036877 |
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| End bp | 1038427 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642598129 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001862531 |
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| Protein GI | 186471213 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.220531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTTCG CGACACGTCC GCCTGGAATC GCAGTGCTGC TCGGGGCAGT CTGCCTGAAC
GGATGCATGC GTGTCGGACC GGATTTCCAC CCGCAGCATG AAGCGTGGAG CGAGCGCTGG
CGCAGTGCGT CGATCGAGCA GGTCACGCAG CCGGGCGCCC AACCCGACCT GCGCCAGTGG
TGGCAGATTT TCGGCGACGC GAATCTCGAA CAGCTGATTG CCGAAGCGGA TGCGAACAAC
GGCGATCTGA AGATTGCCGG TCTGCGTGTG CTCGAGGCGC GCGCGCAACT CGGCGTCGCG
CTGGCGGGGC GCTACCCGCA GGTGCAGCAG GCGAGCGGCA ATGTGTTCTA CGGAGGGCGC
AAGCGCTCCG ATGGCTTCAA TACCCGATCG GGCGGTTACT GGCAGTACGG CGCGAGCTTG
AGCATCGGCT GGGAGCTGGA TTTCTGGGGG CGTTTCAGCC GCGCGATCGA GTCGGCCGAT
GCCGCGTTCT TCGCTGCGCA GGCCAACCGC GAGGCGGCCC TCGTTCTGTT GCATGCCCAG
GTCGCCGATA CCTACTTCAC GATGCGCACG GCCGAGGCCC GGCTGCGCAT CGCGCGCGAG
AACGCCCAAT TGCAAAAGCG CAGCTACGAT ATCGCGCAAA AACTCTTCAA GAGCGGAGAG
ACAGATGAAC TCGATCTCCA GCAGGCGAAG ACGCAGTATC TCGGCACGCT GAGCAGCATC
CCGGAGCTGG AAAGCCAGAT CGTGCTCACG CACCACGCAT TGTCCGTGCT GCTCGGCAGG
CCGCCGGGAC CGCTGCCCGA ACTCGACGCG CAGCCAGGCA AGGATGGTGT AGTGCCGCTC
GTCAACCGTG CCGTGCTGCA GGACGTGCCC GCCGACCTGC TGCTGCGGCG CCCGGACGTT
CGCGCCGCCG AATATCAGAT GGCCGCGCAG TCGGCGCAGA TCGGCGTGGC GAAAGCGGAC
CTGTATCCGT CCGTGTCGCT GGTGGGCTCG CTCGTGTGGA GCGCCAGTTC ACTCACCGGC
TCGCCGAACA CGCTGGCGCT TCTCGCCGGT CCGAGCGTCA CGTGGAATAT TTTCGACCAT
GGAAGGATTA CCAACAACGT GCGGGTGCAG GACGCCCGGC TGCAACAGTT GACCGTCGCC
TATCAGAACA CCGTGCGCGA AGCGGCGCGC GAAGCCGACG ATGCCGCGAC CGCGCTGATT
GCCGCCTTGC AGCGCGACAC GATCCTGAAC GACGCGCAAG GGGCCGCGCG ACGCTCGCTG
ACGCTCGCCA ACACGATCTA TCGCGAAGGC TACTCGGACT TTCAGCGTGT GCTCGATGCG
CAGCGCGCGC TGTTCGCGCA GCAGGACGCC TATGTCGTCA ACCGGAGCAA TGCCGTCGGC
GATCTGATCG CGCTTTACAA GGCCCTCGGG GGAGGATGGG ACACGGATCA GCCGCTGATC
GACGCGGCGA CTCGCGAGCA GATGCGGCAA CGCACCGACT GGGGCGATCT GCTGAACGAC
ACGACCTCGA CATCCGTCTC GCGCAGTCAG GCGGAAGGTG CTTCACGATG A
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| Protein sequence | MSFATRPPGI AVLLGAVCLN GCMRVGPDFH PQHEAWSERW RSASIEQVTQ PGAQPDLRQW
WQIFGDANLE QLIAEADANN GDLKIAGLRV LEARAQLGVA LAGRYPQVQQ ASGNVFYGGR
KRSDGFNTRS GGYWQYGASL SIGWELDFWG RFSRAIESAD AAFFAAQANR EAALVLLHAQ
VADTYFTMRT AEARLRIARE NAQLQKRSYD IAQKLFKSGE TDELDLQQAK TQYLGTLSSI
PELESQIVLT HHALSVLLGR PPGPLPELDA QPGKDGVVPL VNRAVLQDVP ADLLLRRPDV
RAAEYQMAAQ SAQIGVAKAD LYPSVSLVGS LVWSASSLTG SPNTLALLAG PSVTWNIFDH
GRITNNVRVQ DARLQQLTVA YQNTVREAAR EADDAATALI AALQRDTILN DAQGAARRSL
TLANTIYREG YSDFQRVLDA QRALFAQQDA YVVNRSNAVG DLIALYKALG GGWDTDQPLI
DAATREQMRQ RTDWGDLLND TTSTSVSRSQ AEGASR
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