Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6446 |
Symbol | |
ID | 6247985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 1026689 |
End bp | 1028941 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642598120 |
Product | amino acid permease-associated region |
Protein accession | YP_001862522 |
Protein GI | 186471204 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0531] Amino acid transporters [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.396159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATC AACCGAAAAA AATGAACGTC GTGCAACTGA CGTTCATCGT TACCGTGAAC ATGATGGGCT CGGGCATCAT CATGTTGCCT ACCAATATGG CGAAAGTCGG CGCGATCTCG CTGCTGTCGT GGATCGTGAC GGCGCTGGGC TCGATGGCGA TCGCCTACGG CTTCGCGCAG GCAGGCATCA TCAACCAGCG CGCGGGCGGC ATGGCTGCGT ATGCGGAAGA CGCGTACGGC AAGCCCGGCT ACTTCCAGGT GTTCTTCCTG TATTTCCTGT CGCTGGCGAT CGCCAACGTC GCCGTCGCGA GTTCCGCGCT CGGCTATCTG GCGGCGTTCT TCCCCATTCT GACCGCGTCG CCCCTGGCGA CCTGCATCGG CGTGATCGCG CTGTTGTGGA TCACCACGGC GGCCAATTTC GGCGGGCCGA AGCTGACGGG GCGCATCGGC TCGATCACCG TCTGGGGCGT GATTCTGCCT GTCGGCTTCA TGTCGATTGC CGGATGGTTC TGGTTCAAGC CCGGCCTCTT CGCCGCCGCA TGGAATCCGC AAGGACTGCG GCTCATCGAC GGCATGGGCT CCAGTATCGC GCTGACCTTG TGGGCGTTCC TCGGGATGGA GTCGGCGGTG CAGAACTCGT CGGCCGTCGA GAACCCGAAG CGCGACGTGC CGCTCGCCTG CCTGTTCGGC ACGCTCGGCG CCGCGGTCAT CTACGTGCTG TCGACAACCG CGATCCAAGG CATCGTGCCC AACGCCGACC TCGCGAAATC GACGGGTCCG TTCGGTCTCG CGTTCGCGCA TATGTTCAGC CCCATGATCG GCTCGATCGT GATGGCGCTA GCGGCAATGG CCTGCGTCGG CTCGCTGCTC GGCTGGCAGT TCACGCTCGC GCAGACCGCG AAGGACGCGG CCGACAGCAA CATGTTCCCG TCGATTTTCA GCAAGGCCAG TCATAATGGC GCGCCGATTC CGGGCATGAT CATCATGGGT ATCGTGCAGT CGCTGATGGC GCTGTCGACG ATTTCGCCCA ACCTGGCCGA GCAGTTCGCG GCGCTCGTCA ATCTCGCCGT GGTGACGAAC GTGTTGCCTT ACATCATCTC GCTGTCGGCG CTGTTCGTGA TGATGCGCGA CGCGGGCACG GAACCCGCTG TCTACCGGCG CAACGGCATC GTCGCCGTGA TCGCGATGGT CTACTCGGTC TACGCGCTCT ATGCGTCGGG CAAGGATGCC GTGCTTGGCG GCATGCTGGT GATGGCAATC GGCTACGTGA TCTACGGTTT CATCGCGCCG CGTCTGTCGC TGCTGGGCGC CAAGGCCCGC AAGCCGACCA TCGCTGCGGC CAGCATCATT GCCTTCCTCG TGCTCTGCGC CCCGGCTCCG CGCCCGGCGC ATGCAGCGGG CGCGAGTGCC GCGCAGTCGG GCGCACTCGC GCGGATCAAG CAAACGGGCA AGATCAACAT CGGCTATGTC GACGTGGCGA GCCCGTTCGT CTACCGCGAC AGCGAAGGCC GCGCGGTGGG CTACCTGGCA GGCATCTGCC AGGGCGTCGC AGACCAGGTA AAGAGCAGAC TGAGCCTTCC CGCGCTGACC GTGAACTGGA TACAGGTCTC TTCCGACGAA CGCTACCGCG CGCTGCAGGA TCACCGGATC GACCTGTTGT GCGGCGATCC TGAAACGCTG ACGGGCCGCC AGTTCATCAG CTATTCCGTG CCCGTCTATC CGGGCGGCGT CGGCGCGTTG ATGCGCACGG ATGCGGCACG CGGGCTCAAG GAACTGCTGA GCGGCGCCGA CATCGAGGCT CATGGCCCGA TCTGGCGTGC GTCGCCCGCG CAGTTGCTGA ACGCGCAGAC GTTCTCGGCC GTGAAGGATA CGCCCACGGC GCGCTGGCTC AACGACCGCA TCAGGGAGTT CAAGCTGACC GCGCGCGTCG TCACTGTGTC GAGTCATGAA GAAGGCGTAC GGCAAGTGCT CGACCGGAAA ACCAATGTTT TCTTCGCGGA GCGGCAGATC CTGCAGGATG CCGTCAAGCG CAGCACGGCA TCGGACAGCC TGCAGGTCCT GCAGCGCCGC TTCACCGTCG TGCTCGTGTC GCTCGGCGTC GCGCGCGAGG ACGAAGACAT GCGTCTGTTC GTCGATCAAT CGCTGAGCAA GATGTATACG TCGGGTGCCT ATCGCGGGCT CTTTGTGAAG TGGTTCGGCG AGCCGGATGA GGACACGAAG AAGTTCTATC GGGCGGCTAT CTTGCCCGAG TAA
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Protein sequence | MADQPKKMNV VQLTFIVTVN MMGSGIIMLP TNMAKVGAIS LLSWIVTALG SMAIAYGFAQ AGIINQRAGG MAAYAEDAYG KPGYFQVFFL YFLSLAIANV AVASSALGYL AAFFPILTAS PLATCIGVIA LLWITTAANF GGPKLTGRIG SITVWGVILP VGFMSIAGWF WFKPGLFAAA WNPQGLRLID GMGSSIALTL WAFLGMESAV QNSSAVENPK RDVPLACLFG TLGAAVIYVL STTAIQGIVP NADLAKSTGP FGLAFAHMFS PMIGSIVMAL AAMACVGSLL GWQFTLAQTA KDAADSNMFP SIFSKASHNG APIPGMIIMG IVQSLMALST ISPNLAEQFA ALVNLAVVTN VLPYIISLSA LFVMMRDAGT EPAVYRRNGI VAVIAMVYSV YALYASGKDA VLGGMLVMAI GYVIYGFIAP RLSLLGAKAR KPTIAAASII AFLVLCAPAP RPAHAAGASA AQSGALARIK QTGKINIGYV DVASPFVYRD SEGRAVGYLA GICQGVADQV KSRLSLPALT VNWIQVSSDE RYRALQDHRI DLLCGDPETL TGRQFISYSV PVYPGGVGAL MRTDAARGLK ELLSGADIEA HGPIWRASPA QLLNAQTFSA VKDTPTARWL NDRIREFKLT ARVVTVSSHE EGVRQVLDRK TNVFFAERQI LQDAVKRSTA SDSLQVLQRR FTVVLVSLGV AREDEDMRLF VDQSLSKMYT SGAYRGLFVK WFGEPDEDTK KFYRAAILPE
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