| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6417 |
|---|
| Symbol | |
|---|
| ID | 6247956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 994970 |
|---|
| End bp | 996289 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642598091 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001862493 |
|---|
| Protein GI | 186471175 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.386481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAT TGCTGCCCAA GGCAACGACG ATGGTGCTGG CAACGCTGTG CCTGATGTAC
TTCATCACGT ACGTCGATCG CGTCAACATC AGCACGGCGG CCGGTCAGTT CAAGAGCGAG
CTCGGACTCA CGAATACACA GCTTGGACTG ATCTTTTCCG CATTTGCGTA CCCGTACGTG
ATGTTTCAGT TCATCGGCGG CTGGGTCAGC GACCGCTTTG GCGCGCGGCG CACGCTGATC
GCCTGCGCGA CCGTATGGGC CGCCGCGACC GCGCTGACGG GATTCGCGGG CGGCTTCCTG
TCGCTGATCG CCGCGCGGCT GCTGCTCGGG CTCGGTGAAG GCGCGACCTT CCCCGCTTCG
ACGAGCGCGA TGGCCGCGTG GGTGACCAAG GACAAGCGCG GCATGGCGCA AGGCATCACG
CATTCGTGCG CGCGGCTCGG CAATGCAATA GCACCGATGC TCGTGCTTGC GCTGATGACG
GCCTTCAAGT GGCGCTTCTC GTTCTACTTG CTCGGCGCAC TCAGCGCAGG CTGGCTGATG
CTGTGGTACT TCACGTACAC GGAACGGCCC GCTGATCATC CGCGCATCAC GCGCGGCGAA
CTCGCCGCGC TGCCGCCGCC CAAGGTACGT CTCGCCGATG CACCGGGCAC ATGGATGCGT
CTGTACAGAC GCATGGCGCC CGTATCCGCG GTGTACTTCT GCTACAACTG GATTCTCTGG
CTGATGCTCG ACTGGATGCC GCTGTACTTC ATGCACAGCT TTCATCTCAA CATCAAGAAG
GCAGTCGTGT TCACGTCGGG CGTGTTCATC GCGGGCGTGG TGGGCGATCT GGCAGGCGGT
CTCGTGAGCG ACAGGCTGCT GCGCAAATCG GGCAACGTCA GGCTCGCGCG CAGCTATCTC
GTTGCGTGCT GCATGGCGCT CACGGGCCTC TCGCTGATCC CTGTCGTGCT GTTGCACGAT
CCGATGTACT CGCTGATCTT TCTTGCGGCC GCGATGTTCT TCAACGAAAT GAACATCGGT
CCGATGTGGG CGATCCCGAT GGATATCGCT TACGATCGCG CTGGCACCGC GAGCGGCATC
ATGAGCGGCA ATGGCTTTGT CGCGGCGATC GCGAGCCCGG TCGTCGCCGG TTATGTGGTC
GACCGGCTGG GCAACTGGAA TGTGACGTTC ATGCTGTCGA TTGGTGTGAT GGTGTGCGGA
ATCGCATTGA GCTTCGTCAT GAAGCCCGAG CGGCCTTTTG TCGAGAGCCG GCAGGCCAGC
GATGCGCGCA TTGGACCCGA CCTGCTCGAT TCGTCGATGC CGCTCGCCGA CGAGCAGTAA
|
|---|
| Protein sequence | MKRLLPKATT MVLATLCLMY FITYVDRVNI STAAGQFKSE LGLTNTQLGL IFSAFAYPYV
MFQFIGGWVS DRFGARRTLI ACATVWAAAT ALTGFAGGFL SLIAARLLLG LGEGATFPAS
TSAMAAWVTK DKRGMAQGIT HSCARLGNAI APMLVLALMT AFKWRFSFYL LGALSAGWLM
LWYFTYTERP ADHPRITRGE LAALPPPKVR LADAPGTWMR LYRRMAPVSA VYFCYNWILW
LMLDWMPLYF MHSFHLNIKK AVVFTSGVFI AGVVGDLAGG LVSDRLLRKS GNVRLARSYL
VACCMALTGL SLIPVVLLHD PMYSLIFLAA AMFFNEMNIG PMWAIPMDIA YDRAGTASGI
MSGNGFVAAI ASPVVAGYVV DRLGNWNVTF MLSIGVMVCG IALSFVMKPE RPFVESRQAS
DARIGPDLLD SSMPLADEQ
|
|---|
| |