| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6407 |
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| Symbol | |
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| ID | 6247946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 983841 |
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| End bp | 985112 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642598081 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_001862483 |
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| Protein GI | 186471165 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.240201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.750838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGGT CCGGCGGCGA CGGCCTTGAC GGTGATGCCG CCGCGCGGGC CGTCGCCGAG
GCGGTTGCGC GCCGCAGCTA CGGCAAGCTT GTCGCGCTGC TGGCGATGCG CACGCGCGAC
ATCGCCGCAG CGGAAGACGC GCTCGCCGAC GCATTTGCGG CCGCGCTCGC CGACTGGCCG
ACGCACGGCT GTCCCGCGAA TCCCGAAGCG TGGCTGATGA CGGTAGCGCG CCGCCGGGCG
ATCGACGGCG CGCGCCATCG ACGCGCCGGC GACAAGGTGA CAAACCAGCT CGCGATTCTC
ATCGACGAGA TCGACGAACA TGAAGCGGGC GCGCTACCCG ACGGGCGGCT CGCGCTGCTG
TTCGCGTGCA CGCACCCTGC CCTCGATCCC GCGATCCGCA CGCCGCTGAT GCTGCAAGTC
GTGCTGGGAC TCGATGCGAA GACGATTGCG TCGGCGTTCC TGATGTCGCC CACTGCGATG
AGCAAGCGCC TCGTGCGGGC GAAGAACAAG ATTCGCGAAG CGGGCATTCC GTTCAGCGTG
CCCGAGCGCG AAGATTGGCC GGGCCGGCTC GACGCCGTGC TCGAAGCCGT CTATGCCGCG
TATGCGGAAG GCTGGACGGA TCCCGTCGGC GGCGATACCG AGCGGCGTGC TCTGACGGGG
GAAGCGCTGT TTCTCGCGCA CCTGCTCGTC GAGCTGCTGC CCGACGAACC TGAGGCGCTC
GGCCTGCTCG CGTTGATGCT GTTTGCCCAC GCGCGTTGCG ACGCACGGCG CGATGCGGCG
GGCGAGTATG TGCCGCTGTC GGCCCAGGAC CCGGCGACAT GGAACGCGCC GATGATCGAT
GCCGCCGACA CGTTGCTGCG GCACGCGAAC GGTCTTCACG CCATCGGGCG CTTTCAGATC
GAGGCCGCGC TACAGTCGGC GCACGTGGAT CGCTGCCGCA CCCGTCGTCC GAATTGGGAC
GAAGTCGTGC AGCTATACGA TGCGCTGCTT TCGCTTGCGG CGTCGCCCGT GGTCGCCGTG
AATCGCGCGC TCGCGCTGGC GGAGCGCGAC GGCGCGCAGG CGGCCCTCGA TGCGCTCGCG
CCCTATGCGG ACGATCCGCG GCTGGCCGAT TACCAGCCGT ACTGGGCGGC GCGCGCCGAT
CTGCTCGCGC GAGCCGGTGC GACGGCGCAA GCGCTCGGCG CGTACGATCT CGCGATCGGC
CTCGAACGCG ACCCCGCCGT CCGGCGTTTT TTGCAGCGCA AGCGGATGGA GCTGTCGCCC
GTCGGCGGAT GA
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| Protein sequence | MIRSGGDGLD GDAAARAVAE AVARRSYGKL VALLAMRTRD IAAAEDALAD AFAAALADWP
THGCPANPEA WLMTVARRRA IDGARHRRAG DKVTNQLAIL IDEIDEHEAG ALPDGRLALL
FACTHPALDP AIRTPLMLQV VLGLDAKTIA SAFLMSPTAM SKRLVRAKNK IREAGIPFSV
PEREDWPGRL DAVLEAVYAA YAEGWTDPVG GDTERRALTG EALFLAHLLV ELLPDEPEAL
GLLALMLFAH ARCDARRDAA GEYVPLSAQD PATWNAPMID AADTLLRHAN GLHAIGRFQI
EAALQSAHVD RCRTRRPNWD EVVQLYDALL SLAASPVVAV NRALALAERD GAQAALDALA
PYADDPRLAD YQPYWAARAD LLARAGATAQ ALGAYDLAIG LERDPAVRRF LQRKRMELSP
VGG
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