Gene Bphy_6355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6355 
Symbol 
ID6247895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp930247 
End bp931443 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content61% 
IMG OID642598030 
Productporin 
Protein accessionYP_001862432 
Protein GI186471114 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.289379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGA AACTGAAAAC GACGGCATCG GCAGCAGCAC TTCTCGCAGT CGCTGGTGCC 
GCGCACGCGC AATCGTCGGT AACGCTGTAC GGCACGATCG ATTCGGGCCT GCTGTGGCAA
AACACGTCGG CGGCGAATTT TCTGCCGGTC GCTTCGAAGA ATCCGAACCT CGGACACATC
TTTCGCTTCA AGGACGGCGG TCTCTATTCG AGCCTCTGGG GCCTGAAGGG TAGCGAAGAC
ATCGGCGGCG GCTACAAGGT CAACTTCCGG TTGCAGGGGT CTTTCGACAG CGGCACGGGC
AAGTTCCAGC TGAGCGATAC GCCGAACGCG CCGGCGCTCT TCAACCAGAT TGCGACGGTT
GGCGTCTCTG GACCTTTCGG CAAGTTCGAC ATGGGCCGCC AGCTCGCGCC GATGGCCTAT
GCATTCGCCG ACACCGACGT GCGCAACGCG TGGTTCTTCG GCAGCGTTCT GACTGCGTGG
CTGACCATGA ACCAGCAGTC GGGCTGGACG GCCAACAGCA CGAACGGAAG CATCGGCGCG
CTCTATGACA GTAACGCGCT CGTGTATAAC TCGCCGACCT TCTATGGCTT TTCTGCCGCG
CTCGAATATG CGCCCGGCGG CGTTGCGGGT CATTTCCAGG GCGGTACGCG CGAGTCGGCC
GTGCTCAAGT ATTCGAACTA CGGTCTGAAC CTCGCAGCCG TCTACTACAA CGGCCATGAC
GCGAGCCCGT ATCCGTATCC GACTGCAGGC AATCCCGGCG CGACGCCGAT CCCGGCAACT
GGCCAGAACA ACAACCGGTT CGTATATTTT GGCGGGAAGT ACACGTGGAA GGGTCTCTCG
GTCTCGGGGT CTTTCAGCAA CGGCCGCAAT CCGGCGAATC CGAACGGGAA CCTGGCGGCG
GGTGTCGCTT CGGGGGATTT CGACATGTGG ACGGGAGGCA TCGGCTATCG CTTCTCGCCG
GCGTTCGAAC TCACGTCGGG CGTCTACTAT GTGAAGGACG AGAAGCACAA CCAGAACCAG
TCGACGGCTT ATGTGCTGGG CGCCGATTAC AACCTGTCCA AGACGACGAC GCTGTATGCG
CAGGGCGGCT ATGTGTCCAA CCGTGGCACG ATGAATCAGA CACTCGTGTA CGGACAGCCT
GTCGCCGTGG GCAAGAATAC GGCTGCAGGC ATGCTGGGCA TCCGTCACGC CTTCTGA
 
Protein sequence
MKVKLKTTAS AAALLAVAGA AHAQSSVTLY GTIDSGLLWQ NTSAANFLPV ASKNPNLGHI 
FRFKDGGLYS SLWGLKGSED IGGGYKVNFR LQGSFDSGTG KFQLSDTPNA PALFNQIATV
GVSGPFGKFD MGRQLAPMAY AFADTDVRNA WFFGSVLTAW LTMNQQSGWT ANSTNGSIGA
LYDSNALVYN SPTFYGFSAA LEYAPGGVAG HFQGGTRESA VLKYSNYGLN LAAVYYNGHD
ASPYPYPTAG NPGATPIPAT GQNNNRFVYF GGKYTWKGLS VSGSFSNGRN PANPNGNLAA
GVASGDFDMW TGGIGYRFSP AFELTSGVYY VKDEKHNQNQ STAYVLGADY NLSKTTTLYA
QGGYVSNRGT MNQTLVYGQP VAVGKNTAAG MLGIRHAF