Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6355 |
Symbol | |
ID | 6247895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 930247 |
End bp | 931443 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642598030 |
Product | porin |
Protein accession | YP_001862432 |
Protein GI | 186471114 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.289379 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTGA AACTGAAAAC GACGGCATCG GCAGCAGCAC TTCTCGCAGT CGCTGGTGCC GCGCACGCGC AATCGTCGGT AACGCTGTAC GGCACGATCG ATTCGGGCCT GCTGTGGCAA AACACGTCGG CGGCGAATTT TCTGCCGGTC GCTTCGAAGA ATCCGAACCT CGGACACATC TTTCGCTTCA AGGACGGCGG TCTCTATTCG AGCCTCTGGG GCCTGAAGGG TAGCGAAGAC ATCGGCGGCG GCTACAAGGT CAACTTCCGG TTGCAGGGGT CTTTCGACAG CGGCACGGGC AAGTTCCAGC TGAGCGATAC GCCGAACGCG CCGGCGCTCT TCAACCAGAT TGCGACGGTT GGCGTCTCTG GACCTTTCGG CAAGTTCGAC ATGGGCCGCC AGCTCGCGCC GATGGCCTAT GCATTCGCCG ACACCGACGT GCGCAACGCG TGGTTCTTCG GCAGCGTTCT GACTGCGTGG CTGACCATGA ACCAGCAGTC GGGCTGGACG GCCAACAGCA CGAACGGAAG CATCGGCGCG CTCTATGACA GTAACGCGCT CGTGTATAAC TCGCCGACCT TCTATGGCTT TTCTGCCGCG CTCGAATATG CGCCCGGCGG CGTTGCGGGT CATTTCCAGG GCGGTACGCG CGAGTCGGCC GTGCTCAAGT ATTCGAACTA CGGTCTGAAC CTCGCAGCCG TCTACTACAA CGGCCATGAC GCGAGCCCGT ATCCGTATCC GACTGCAGGC AATCCCGGCG CGACGCCGAT CCCGGCAACT GGCCAGAACA ACAACCGGTT CGTATATTTT GGCGGGAAGT ACACGTGGAA GGGTCTCTCG GTCTCGGGGT CTTTCAGCAA CGGCCGCAAT CCGGCGAATC CGAACGGGAA CCTGGCGGCG GGTGTCGCTT CGGGGGATTT CGACATGTGG ACGGGAGGCA TCGGCTATCG CTTCTCGCCG GCGTTCGAAC TCACGTCGGG CGTCTACTAT GTGAAGGACG AGAAGCACAA CCAGAACCAG TCGACGGCTT ATGTGCTGGG CGCCGATTAC AACCTGTCCA AGACGACGAC GCTGTATGCG CAGGGCGGCT ATGTGTCCAA CCGTGGCACG ATGAATCAGA CACTCGTGTA CGGACAGCCT GTCGCCGTGG GCAAGAATAC GGCTGCAGGC ATGCTGGGCA TCCGTCACGC CTTCTGA
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Protein sequence | MKVKLKTTAS AAALLAVAGA AHAQSSVTLY GTIDSGLLWQ NTSAANFLPV ASKNPNLGHI FRFKDGGLYS SLWGLKGSED IGGGYKVNFR LQGSFDSGTG KFQLSDTPNA PALFNQIATV GVSGPFGKFD MGRQLAPMAY AFADTDVRNA WFFGSVLTAW LTMNQQSGWT ANSTNGSIGA LYDSNALVYN SPTFYGFSAA LEYAPGGVAG HFQGGTRESA VLKYSNYGLN LAAVYYNGHD ASPYPYPTAG NPGATPIPAT GQNNNRFVYF GGKYTWKGLS VSGSFSNGRN PANPNGNLAA GVASGDFDMW TGGIGYRFSP AFELTSGVYY VKDEKHNQNQ STAYVLGADY NLSKTTTLYA QGGYVSNRGT MNQTLVYGQP VAVGKNTAAG MLGIRHAF
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