| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6347 |
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| Symbol | |
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| ID | 6247887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 920755 |
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| End bp | 922278 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642598022 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001862424 |
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| Protein GI | 186471106 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.197089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTATCC GTGAGAGTTC AGGACTGAAA GGCGCTTTCG CGACACTGGC GCGCCAAACG
TCAACGCCAG TCGTGGTCAT TGTGGGCGGC CTGATTGCCG CGTTAGTCAT GGTTGGATTA
TGCGCGCTTG TCCTCTATGA AGGCCGCCTG GACGCGCTCG AAAGGGCCCG CAGTACTTCC
GGGAATCTGG CGCTCATCGC CGAGCGCGAT ATCGAACGCA ATTTCGAGCT GTATGAACTG
TCGTTGCAGG CAGTCGTGGA TGGCATGAAT CGCAATGATG TCATGGCGCT GCCGCCGCGA
TTGCGCAACG ACGTGCTGTT CGACCGGGCA GCCAACGCCA AGTATCTTGG CTCCGTCCTT
GTGCTGGATG AAGCAGGCAA CATCGTGATG GATTCGGCCG ATGTAAAACC GCGACGAGGC
AGTTTTGCAG ACCGGCCATA CTTCACGGTA CAGCGGGACC ATCCGGAAAC GGGACTGTAC
ATCAGCGATC CCTACGCGTC ACGGCTACGC GGTGGCGCGG CCAGTATTGC TCTGAGCCGC
AGGCTATCGC ATCCAGACGG CTCTTTTGCG GGCGTCGTTA TGATCGCCGT GAATCTCGAT
TATTTTCGCA ATCTTTTTGC GGGACTGTCG CTTGGCACAC ACGGAGCTGT CTCGCTCATC
ACCCAGCGCG GCATCATGGT CATGCGGCAA CCTTACGATA CCCACATCAT TGGCCGCGAC
ATCAGCCAGG CCGAGACATT CAGACGCTTT CGCGCTGAAC CACAAGGCAG CTTCAGCGAA
ACGGCGTCGA TAGATGGTGT GCGGCGTCTT TACTACTTCC GAAATTTTCC AAGCCTTCCA
TTGGTGATCA TGGTGGCCGA GGCGGAACAG GACGTTTATG CCGACTGGCG TCGCCGCGCC
ATCACGATAG GCTCATTGAT GGCCATATTC GCGCTCGTCT TCGTCGGGCT GTCCGTGATG
CTCGCCGCGC AGTTGCGGCT TCGCATACGG GCAGAGGCCG AGCTGGCAGT GCTGGCGCGC
ACCGATGCAC TGACCGGGCT GCACAATCGC CGGTCACTTG GCGACATACT CGAAGACGAA
TGGCGGCGAG CCAGCCGCAC ACATACCCCG TTCGCGCTGC TTTTCCTGGA CATCGATCGC
TTCAAGGCAT TCAACGATGC ATATGGCCAT CAAGCCGGTG ATGCAGCGCT CGCGAGCGTT
GCCCATTGCA TCGCTGACAA CATACGACGT CCTGCCGACA AGGCCGCGCG GTACGGCGGC
GAAGAGTTCG TCGTCTTGTT ACCCGACACG TCCCCAGCGG GCGCCGCGCT TGTTGCCGAG
AAAATCCGGG CCGCCATCTC CGAACTTCCT ATCGAACACG GCGGCAGCGA GTACCGTCGA
CTCACCGCAA GCATCGGCCT GGCACACTGG CGGCCAGGAG ACAACGCGGA TGTCAGCGCC
CTGATGCGGG CAGCAGACGA TGCGCTTTAC ACCGCAAAAG CAAGGGGCCG CAACGTGGTC
GTAACGGCCA TTGCTCTGGA CTAG
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| Protein sequence | MTIRESSGLK GAFATLARQT STPVVVIVGG LIAALVMVGL CALVLYEGRL DALERARSTS
GNLALIAERD IERNFELYEL SLQAVVDGMN RNDVMALPPR LRNDVLFDRA ANAKYLGSVL
VLDEAGNIVM DSADVKPRRG SFADRPYFTV QRDHPETGLY ISDPYASRLR GGAASIALSR
RLSHPDGSFA GVVMIAVNLD YFRNLFAGLS LGTHGAVSLI TQRGIMVMRQ PYDTHIIGRD
ISQAETFRRF RAEPQGSFSE TASIDGVRRL YYFRNFPSLP LVIMVAEAEQ DVYADWRRRA
ITIGSLMAIF ALVFVGLSVM LAAQLRLRIR AEAELAVLAR TDALTGLHNR RSLGDILEDE
WRRASRTHTP FALLFLDIDR FKAFNDAYGH QAGDAALASV AHCIADNIRR PADKAARYGG
EEFVVLLPDT SPAGAALVAE KIRAAISELP IEHGGSEYRR LTASIGLAHW RPGDNADVSA
LMRAADDALY TAKARGRNVV VTAIALD
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