Gene Bphy_6346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6346 
Symbol 
ID6247886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp919828 
End bp920529 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content63% 
IMG OID642598021 
ProductGntR domain-containing protein 
Protein accessionYP_001862423 
Protein GI186471105 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.385639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.289379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA CTGAACCCAA GCGGCTTTAC CAATCCGTCG CGACGCAAAT CCTCGCGTTG 
ATTCACCAAG GTGACTTCCC GGCTGGAGAA CGCCTTCCAC CTGAGCGCGA ACTGGCACTG
AAGCTGGGCG TGTCGCGTCC ATCGCTGCGC GAGGCTTTGA TCGCACTGGA GATAGGGGGG
CAGGTTGAAA TCCGCATGGG TTCGGGTGTC TATGTGCGCG AGACCAGCGC AGACGAAGCG
GGCTCAGTCG GTGCCCTTGG GGACAGCCCA TCGGAATTGA TGCAGGCGCG CGCGGCGATC
GAGGGGAGCG TCATCGTGCT CGCCACGGCG CGCATGACTG CGGCGATGCT GGACCGGTTG
CGCCGCACAG TCGAACGAAT GCGAAGGCTT GCGGCGGCGG GGAAATCGCC CGTTGAAGCG
GACCGGCAGT TCCACATGTT GATCGCGGAA GCTGCAGGCA ATTCCGTGCT CAGCCGATAC
GTGGGCGAGC TGTTCGACAG TCGCCACGAT CCCATCGCTG CCGCCATGCG CGGTCATGCA
GAGAGCGCGC AAACATGGAC GTCGGCCGTG CAGGAACACG AGCTGGTGCT CAAGGCCTTG
CAGTCCGGCG ATCCTATCGC GGCGCAAGCG GCAATGCGCT CGCATCTCAT GGCTTCCGAG
GATCGCTGGA TGAGCGGCGC ATTAAAGCAA GGCGCGGAAT AG
 
Protein sequence
MKSTEPKRLY QSVATQILAL IHQGDFPAGE RLPPERELAL KLGVSRPSLR EALIALEIGG 
QVEIRMGSGV YVRETSADEA GSVGALGDSP SELMQARAAI EGSVIVLATA RMTAAMLDRL
RRTVERMRRL AAAGKSPVEA DRQFHMLIAE AAGNSVLSRY VGELFDSRHD PIAAAMRGHA
ESAQTWTSAV QEHELVLKAL QSGDPIAAQA AMRSHLMASE DRWMSGALKQ GAE