| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6340 |
|---|
| Symbol | |
|---|
| ID | 6247880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 912553 |
|---|
| End bp | 913689 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642598015 |
|---|
| Product | mannitol dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001862417 |
|---|
| Protein GI | 186471099 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00129843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.444524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC CGATACTTCA ATTCGGCACA AGCCGATTTC TACTGGCGCA CGTCGACATG
TTCGTCTCGC AAGCACTCGA GCGAGGGGAT GCGATCGGCG GTATCAGCGT TGTGCAGACA
ACGGGCAATC CGGCCAGTCA TGCGCGGGTC GCCGCTCTTT CGCAAGGCGC CGGCTATCCG
GTTCGCATTC GTGGGAGCGA TGGCGGCGCG ATCGTGGACA AGTCCATCGT CTGCCATGCG
ATTCGCGATG CATGGGTTGC GGACCGCGAT TGGGCAGCGG TGCGCCGCGC CGCGATGGAT
AACGTGCGCG TCGTTGTGTC GAATACGGGC GATATGGGTT ATCGACTCGA CGCGCGTGAT
TCGGCCGACG TGCTCAAGGG CGACGGTATC GTGCCGCGCA GTTATCCGGC CAAGCTGCTC
GCCTTGCTCT ACGCACGGTG GCATGAACGT GCGCACGGCG GCGTGTCGAT TTTTCCCTGC
GAACTGGTGC AGAACAATGG CGACACATTG CGCGGCATCG TGCTCGATCT CGCACGGCAA
TGGGCGCTGC CGGATGCTTT CGCCGACTAT CTGCAGAGAG ACTGCGTGTG GGTGAACTCG
CTTGTCGACA GAATCGTGTC CGCGCCCATC GATCCCGTTG GCGCAGTGGC CGAGCCCTAC
GCGCTGTGGG CGATCGAGCG GCGCGCCTGC ATGGAAATGC CATGCACGCA CGAGAACATC
GTCATAACAG ACGACCTCCG CATCTACGAG CGCCTGAAGC TGTTCTTCCT GAATCTGGGC
CATAGCTGGC TCGCCGAGCA GTGGATCACG GGCGGGCGGC CGTCATCTGA GACTGTGCTC
GATGCGATGA ACGATCCTTG CCTGCGCGAT GGGCTCGAAA CCGTCTGGCA GGAAGAAGTG
TTGCCGGTTT TTGCGGCAAT GGATCAGCGC GACCGGGCTG AACGCTACAT AGGCAGTGTG
CGAGAGCGAT TGATGAATCC GCACCTTGAT CACCGTATTG CAGACATCGC TCAAAACCAT
GCCGAGAAGA TAAAAAGGCG TGTATTGCCG CTGATCGAAC TCGCAGACTC GTTAGCGGTA
CGAGCGGCGC AGCCGCACCT GCGCGCAGTG ATCGCGCGAT ACGGGCTCAG TCGGTAA
|
|---|
| Protein sequence | MSEPILQFGT SRFLLAHVDM FVSQALERGD AIGGISVVQT TGNPASHARV AALSQGAGYP
VRIRGSDGGA IVDKSIVCHA IRDAWVADRD WAAVRRAAMD NVRVVVSNTG DMGYRLDARD
SADVLKGDGI VPRSYPAKLL ALLYARWHER AHGGVSIFPC ELVQNNGDTL RGIVLDLARQ
WALPDAFADY LQRDCVWVNS LVDRIVSAPI DPVGAVAEPY ALWAIERRAC MEMPCTHENI
VITDDLRIYE RLKLFFLNLG HSWLAEQWIT GGRPSSETVL DAMNDPCLRD GLETVWQEEV
LPVFAAMDQR DRAERYIGSV RERLMNPHLD HRIADIAQNH AEKIKRRVLP LIELADSLAV
RAAQPHLRAV IARYGLSR
|
|---|
| |