| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6290 |
|---|
| Symbol | |
|---|
| ID | 6247833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 855914 |
|---|
| End bp | 856471 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642597968 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001862370 |
|---|
| Protein GI | 186471052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00692332 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.214815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG GACTGATAGC CGGGCTGCTA AGCGGTGTGC TGCTTGCCGG CTGCATGTCC
GCCGGGGTCG AAGTGAGGCC TGAACAGATG GCGACCTTCA GGCGTGGCGT GACGACGCTC
CAGGAAGTGA CCGCCGCGCT TGGCCCGGCA TCAGTGCAGA CCGCGCTGGA CGACGGCTCG
ATGCTGCTCG TGTATACCTA CGTAACGTCG AGGCCGCACC CCGAGAGCTA TATCCCGTTC
ATCGGGGCGC TGGTTGCTGG TGCCGACACG CGTTCCTCGG CAGCCGTGTT CCTGTTCGAT
ACGCGCGGCG TCCTTAAGAG TGCGAACACC ACGACCTCGA ACGTTGGTAC AGGCCTGACC
GCCGACCGGC ACACCGTCCC TGCGCCAATC GTTGAGGCTC CCGTCGGGGT CAGGAGTAAC
AGGCCGGCCG CCGTGCAGAA TATCGAGTCC CCCGTCGCGG TCAAGAGCAT TCCGCCGCCC
GCCGCGGTGA GCGTCGAGCC GCTTCAGGAA GAAGAGCAGT CGGGACCGGA AAACAGCGCC
GAGCCGCCAC CGGAATAA
|
|---|
| Protein sequence | MKRGLIAGLL SGVLLAGCMS AGVEVRPEQM ATFRRGVTTL QEVTAALGPA SVQTALDDGS
MLLVYTYVTS RPHPESYIPF IGALVAGADT RSSAAVFLFD TRGVLKSANT TTSNVGTGLT
ADRHTVPAPI VEAPVGVRSN RPAAVQNIES PVAVKSIPPP AAVSVEPLQE EEQSGPENSA
EPPPE
|
|---|
| |