Gene Bphy_6283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6283 
Symbol 
ID6247826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp848557 
End bp849816 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content64% 
IMG OID642597961 
Productglycine hydroxymethyltransferase 
Protein accessionYP_001862363 
Protein GI186471045 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.461604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCAA AAGAACAGAC GATCGCGGGC TTCGATCCCG AACTGTCGGC CGCGATGCTG 
GGCGAGCGTC AACGACAGGA AGATCACATC GAGCTGATCG CGTCGGAAAA CTATGCGAGT
CCGCGCGTGC TCGAAGCGCA GGGTTCCGTG CTGACCAACA AGTATGCGGA AGGGTATCCG
GGCAAGCGCT ATTACGGCGG ATGCGAGCAT GTGGACGTGG TCGAATCGCT GGCCATCGAG
CGGGCCAGGC AGCTGTTCGG CGCTGGGTAC GCCAACGTTC AGCCGCATAG CGGATCGCAG
GCGAACGCGG CCGTCTATCT CGCGCTGCTC GCGCCCGGCG ACGCCATGCT TGGCATGAGC
CTCGCGCACG GCGGCCACCT GACGCACGGC GCGAAGGTGT CATTTTCGGG CAAGGTGTTC
AACGCGGTTC AGTATGGCGT CGACGCGGCG ACGGGACTGA TCGACTACGA CGACGTCGCG
CGGCTCGCGC TCGAACATCG ACCGAAGATG ATCGTGGCCG GCTTCTCAGC GTATTCGCGC
GTGCTCGACT TCGCGCGCTT TCGCCAGATC GCCGACAGCG TCGGCGCATT TCTGTTCGTC
GATATGGCGC ATGTGGCCGG TCTCGTTGCG GCAGGTCTCT ACCCGAATCC AGTTCCATTT
GCGGACGTCG TGACGACGAC CACGCACAAG ACGCTGCGCG GTCCGCGGGG CGGTCTGATC
CTCGCGCGCG CCAACGAAGC GATCGAAAAG AAGCTCAGCG CGATGGTCTT TCCAGGCACG
CAAGGCGGCC CGCTGATGCA TGTGATCGCG GCGAAAGCGG TGGCGTTCAA GGAAGCGCTC
GGCGCGGAAT TCGTCGCGTA CCAGAAGCAG ACGCTGAACA ATGCGCGCGC GATGGTGGGC
GTTTTCATCG AGCACGGCTA CAAGGTGGTG TCGGGCGGCA CGGACGATCA CCTCTTCCTC
GTGGATCTCG TCGATAAAGG GATCACGGGC AAGGACGCGG ACGCGGCGCT CGGCCGCGCG
CACATCACGG TGAACAAGAA CGCGGTGCCG AACGACCCGC AGTCGCCGTT CGTGACGAGC
GGCATTCGGA TCGGCACGCC GGCCATCACG ACGCGCGGAT TCGATGAGAA CGATGCAAGG
CTGACGGCGT CGCTCGTCTG CGATGTGCTC GACAGTATCG GCGATGAGCG GACGGAGACA
CACGTGCGCG ACCAGGTCGC GCGACTGTGC GCGCGATTGC CCGTGTACAG AGGGCTGTGA
 
Protein sequence
MFSKEQTIAG FDPELSAAML GERQRQEDHI ELIASENYAS PRVLEAQGSV LTNKYAEGYP 
GKRYYGGCEH VDVVESLAIE RARQLFGAGY ANVQPHSGSQ ANAAVYLALL APGDAMLGMS
LAHGGHLTHG AKVSFSGKVF NAVQYGVDAA TGLIDYDDVA RLALEHRPKM IVAGFSAYSR
VLDFARFRQI ADSVGAFLFV DMAHVAGLVA AGLYPNPVPF ADVVTTTTHK TLRGPRGGLI
LARANEAIEK KLSAMVFPGT QGGPLMHVIA AKAVAFKEAL GAEFVAYQKQ TLNNARAMVG
VFIEHGYKVV SGGTDDHLFL VDLVDKGITG KDADAALGRA HITVNKNAVP NDPQSPFVTS
GIRIGTPAIT TRGFDENDAR LTASLVCDVL DSIGDERTET HVRDQVARLC ARLPVYRGL