| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6271 |
|---|
| Symbol | |
|---|
| ID | 6247816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 835511 |
|---|
| End bp | 836581 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642597951 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001862353 |
|---|
| Protein GI | 186471035 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0482396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.559983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACT TGACACTCCA GTCCATCACC AAGCGCTTCG ATACCACGTA CGCAGTCGAT
CATGTCGACC TGAGCGTGCC GGACGGGAAG CTGGTCTGCT TTCTCGGGCC ATCCGGCTGC
GGCAAGACTA CGCTGATGCG GATCATCGCC GGTCTCGAAA CAGCCACGGC GGGCACGGTG
ACATTTGCCG GCCGCGATCT GACGCAGGTG CCGGCCAACC GCCGTGAGTT CGGCATGGTG
TTCCAGTCGC TTGCGCTGTT TCCGCACATG ACCGTAGCGG AAAACGTCGC CTATCCGCTG
CGGCTGCGCC GCGTCAACCG GGGGGCGCAG GTCAGACGCG TCGCCGAGTT GCTCGAGATG
ATCCAGTTGC CACACATGGC GCAGCGCAAG GTCGCGCAAT TGTCCGGCGG ACAGCGGCAG
CGCGTCGCGA TCGCGCGAGC GATTGCTTCC TCTCCGAAGC TCCTGCTCCT CGACGAGCCG
CTATCCGCGC TCGACGCAAA GCTGCGCGAA GCGATGCAGG TCGAAATCCG GCTGCTGCAG
CAGCGCCTGG GCATCACGAC GATCATGGTC ACGCACGATC AGCGCGAGGC GATGACGATG
GCCGATGAAA TCGTCGTGAT GGAAAAAGGC CGCATCGCGC AAGTGGGCAA ACCGCTGGAC
ATCTACCGTG AACCCGTCAA CGAGTTCGTC GCGGACTTCA TCGGGCTCGG CAACATCCTG
CCTGTGACGT TCGACGGCGG CCAGATCGGG CTGCCCGGCG GGCAATCGAT CGCAGTGAAG
CCGGCGATGC GAGCCCCTGG CGGGCCCGAT GATATCCGGC TTCTGATTCG CCCCGAGGAC
GTGTGTGTCA GGCCCGCGAC CGCGACCCCG GGCCAGAACA CCCTGCCAGG CACGGTGACG
TTCGTGCGCG ACGTCGGGGC GTCGATCGAG GCCACGATCG ACTGCGAAGG CTTCACGCTG
ACGGCGGCCA CGACGCCGCG CGAGACACCC GGCCTCCATG TCGGCATGCG GGTGTTGGCC
GAATTGCCGG CGCATGCGTG CAAGCTCATC GCCGCGTGCA CCGCACATTG A
|
|---|
| Protein sequence | MTHLTLQSIT KRFDTTYAVD HVDLSVPDGK LVCFLGPSGC GKTTLMRIIA GLETATAGTV
TFAGRDLTQV PANRREFGMV FQSLALFPHM TVAENVAYPL RLRRVNRGAQ VRRVAELLEM
IQLPHMAQRK VAQLSGGQRQ RVAIARAIAS SPKLLLLDEP LSALDAKLRE AMQVEIRLLQ
QRLGITTIMV THDQREAMTM ADEIVVMEKG RIAQVGKPLD IYREPVNEFV ADFIGLGNIL
PVTFDGGQIG LPGGQSIAVK PAMRAPGGPD DIRLLIRPED VCVRPATATP GQNTLPGTVT
FVRDVGASIE ATIDCEGFTL TAATTPRETP GLHVGMRVLA ELPAHACKLI AACTAH
|
|---|
| |