| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6250 |
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| Symbol | |
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| ID | 6248786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 813115 |
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| End bp | 814281 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597935 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001862337 |
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| Protein GI | 186471019 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA ACCGCATTCG ATCGGGGTTA CTCATTGCGG CCGCGACGCT CACAGCCGCC
GCGATTCTGG CGGGCGCGTT CTGGCCGAAA GCGGTTGTTG TCGATACGGC ACCGGTGAGC
CGGGGACCGC TTCGGGTCAC GATCGACGAG GATGGGGAGA TCCGAGCACA TGACCGCTAC
GTCGTCACGG CGCCGATCAC TGGTCGTTTG CTGCGCGTGA CCATGCGCGA GGGGGACCAT
GTGCGTGCGG GACAGGTGAT TGCGGTGCTG GTGCCCGTCG CTATGACGCC CGGGGAAAGC
GCGGAACAGC GCGCCCATGT GGAGTCGGCG GAAGCGGCTT ATGGGGAAGC GCTGGCGCAC
GTCGATCATG TTCGTGCCGA TCTCGAACAG GCGCGCAGGG AGTATCAGAG AGGCAAGGCA
TTGATCGAGT ATGGCGGCAT CTCGAAACAG GGATTGGAGC AACTCCGCGT CACCGAGGCA
TCCGGCATGA GCGACCTCGA TGCAGCCCGC GCCCGCGCAA CATCTGCGGC AGCAGAAGTA
CGAGCCGCGA AGGCGAATCT GCGAGCACTG GAAGCCGGGC ATCCCGTGGA AGTCCGCGCT
CCTGTCGATG CCGTCCTCCT GCGTGTTGAT GAGCGGAGCG AACGCGTAGT GTCAGCCGGT
GCTGCCGTGA TGGTGCTCGC CGATCCCTCT CGCTATGAAG TGGTCGTAGA TGTTCTCTCA
ACGGACGCCG TCAAGATCAG TCCCGGGATG CGCATGTCGG TGGAAGACTG GGGCGGGCCT
GTGCCAATCG ATGCAAAAGT GCGGGTGGTC GAGCCGGGCG CTTTTACCAA GGTTTCGGCG
CTGGGAGTTG AAGAGCAGCG CGTGCATGTC ATTGCTGATC TGTGGGGCGT CCCGGGCCGG
CTGAACGACG GGTATCGGGT CTTGGGCAGG ATTGTGATCT GGGAAAGATC TGACGTGGTA
AAACTTCCCA TCGGCTCGCT GTTCCGCTGT GGGCAGCAAT GGTGCGTTTT CGCGGTCGAG
CGCAAGCGTG CTATACAGCG CGTTGTGCGC ATCGGACAGC GCAATTCCGA AGAAGCGGAG
ATTCTCGACG GTCCTGGCAG TAATCAGATC GTGATCGTAT ATCCACCCGG TACCTTGACG
AATAATGCCC GAGTTATGGT GCGCTGA
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| Protein sequence | MKRNRIRSGL LIAAATLTAA AILAGAFWPK AVVVDTAPVS RGPLRVTIDE DGEIRAHDRY
VVTAPITGRL LRVTMREGDH VRAGQVIAVL VPVAMTPGES AEQRAHVESA EAAYGEALAH
VDHVRADLEQ ARREYQRGKA LIEYGGISKQ GLEQLRVTEA SGMSDLDAAR ARATSAAAEV
RAAKANLRAL EAGHPVEVRA PVDAVLLRVD ERSERVVSAG AAVMVLADPS RYEVVVDVLS
TDAVKISPGM RMSVEDWGGP VPIDAKVRVV EPGAFTKVSA LGVEEQRVHV IADLWGVPGR
LNDGYRVLGR IVIWERSDVV KLPIGSLFRC GQQWCVFAVE RKRAIQRVVR IGQRNSEEAE
ILDGPGSNQI VIVYPPGTLT NNARVMVR
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