Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6221 |
Symbol | |
ID | 6247775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 784332 |
End bp | 785987 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642597910 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001862312 |
Protein GI | 186470994 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.768834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGTC GTTTCGACTA TGTCGTCGTC GGCGCCGGGT CCGCCGGCTG CGTCCTCGCC AACCGTCTGT CGGAAGACGG GCGCTATTCG GTCTGTCTGC TCGAAGCGGG TCCCGCCGAT CGCTACCTCT GGATTCATAT TCCGATCGGC TACGGCAAGA CGATGTTTCA TCCCGTCTAT AACTGGGGCT TCTATACGGA CGCCGATCCG AACATGAACG ACCGCAAGCT CTATTGGCCT CGTGGCCGCA CGCTCGGCGG ATGCAGTTCG ATCAATGGCC TGATCTACGT GCGCGGGCAG AAAGAGGACT ACGACCATTG GGCCGCGCTC GGCAATCGCG GATGGAGCTG GGACGAATGC CTGCCGTACT TCCGGCGGCT CGAGCACAAC CAACTGGGCG AGGGGCCGAC GCGCGGTGTC GACGGGCCGC TGTGGGCGTC GACAATCCGG CAGCGTCATG AACTCGTCGA TGCGTTCGTC GCGGCATCGA ACCGGCTCGG CGTGCGGACT GTCGACGACT TCAATACGGG CGATCAGGAA GGCGTCGGCT ACTACCAGCT GACCACGCGC CACGGCTTGC GCTGTTCGAC AGCCGTCGCG TATCTGAAGC CTGCGCGGCG CCGCGCGAAT CTGCACGTCG AAACGGAGGC GCAGGCGTCG AAGATCCTGT TCGACGGCAC GCGCGCAACG GGCATTCAAT ACGTGCAGCA TCGCGAGACA CGCGAAGTGC ACGCGGATCG CGAGGTGATA TTGACGGCGG GCGCGCTGCA ATCGCCGCAA TTGCTGCAAC TGTCGGGCGT CGGTCCGGGG GCGCTGCTGC GCGAGCACGG CATTCCCGTC GTGGCTGATC GCGCGGGTGT CGGCGAAAAT CTGCAGGACC ATTTGCAGGT TCGCCTGATC TACGAAGTCA CGAAGCCGAT CACCACCAAC GACCAGCTTC ATTCATGGAC GGGCCGCGCG AAGATGGGCC TGCAATGGGC GCTGTTTCGC GGCGGACCGC TTGCGGTCGG CATCAATCAG GGCGGCATGT TCTGCCGCGC GCTGCCTGAC GAAGCGAAGA CGCCCGACAT CCAGTTCCAC TTCTCGACGC TTTCCGCCGA TTCCGCTGGC GGCGACGTAC ACGCGTTTCC CGGCTGCACG TATTCGATCT GCCAGTTGCG GCCCGAATCG CGCGGCGTGG TGCGTATCCG CTCGACGAAT CCGCTCGAGG CGCCGTCGAT CCAGCCGAAC TATCTCGCGA CCGATCTCGA CCGGCGCACG GCCGTCGCGG GCGTGCGCTT TGCGCGGCGC GTCGCCGCAA CGCAGCCGAT GGCCTCGCTG ATGAAGCGCG AAGTACGGCC CGGCGCCGAC GCGCGGACGG ACGACGAACT GCTGCATTTC TGCCGCGAGT ACGGACAGAC GATTTTCCAT CCGTCGGGCA CGGTGAAGAT GGGGACAGCC GACGATCCGC TCGCCGTGGT CGACGAACGC CTGCGCGTGT ATGGCACGCG CGGGCTGCGT GTCGTCGATT GCTCGATCAT GCCGACGCTC GTGTCCGGCA ACACCAACGT GCCGATCGTA ATGGTCGCGG AAAAGGCGTC CGACATGATC CTCGACGACG CCCGCGCCCC TGGCCCTCAC GAGCGCGTGA ACGCGCCGGT GGAAGCCGCC GCCTGA
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Protein sequence | MPRRFDYVVV GAGSAGCVLA NRLSEDGRYS VCLLEAGPAD RYLWIHIPIG YGKTMFHPVY NWGFYTDADP NMNDRKLYWP RGRTLGGCSS INGLIYVRGQ KEDYDHWAAL GNRGWSWDEC LPYFRRLEHN QLGEGPTRGV DGPLWASTIR QRHELVDAFV AASNRLGVRT VDDFNTGDQE GVGYYQLTTR HGLRCSTAVA YLKPARRRAN LHVETEAQAS KILFDGTRAT GIQYVQHRET REVHADREVI LTAGALQSPQ LLQLSGVGPG ALLREHGIPV VADRAGVGEN LQDHLQVRLI YEVTKPITTN DQLHSWTGRA KMGLQWALFR GGPLAVGINQ GGMFCRALPD EAKTPDIQFH FSTLSADSAG GDVHAFPGCT YSICQLRPES RGVVRIRSTN PLEAPSIQPN YLATDLDRRT AVAGVRFARR VAATQPMASL MKREVRPGAD ARTDDELLHF CREYGQTIFH PSGTVKMGTA DDPLAVVDER LRVYGTRGLR VVDCSIMPTL VSGNTNVPIV MVAEKASDMI LDDARAPGPH ERVNAPVEAA A
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