Gene Bphy_6221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6221 
Symbol 
ID6247775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp784332 
End bp785987 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content65% 
IMG OID642597910 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001862312 
Protein GI186470994 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.768834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTC GTTTCGACTA TGTCGTCGTC GGCGCCGGGT CCGCCGGCTG CGTCCTCGCC 
AACCGTCTGT CGGAAGACGG GCGCTATTCG GTCTGTCTGC TCGAAGCGGG TCCCGCCGAT
CGCTACCTCT GGATTCATAT TCCGATCGGC TACGGCAAGA CGATGTTTCA TCCCGTCTAT
AACTGGGGCT TCTATACGGA CGCCGATCCG AACATGAACG ACCGCAAGCT CTATTGGCCT
CGTGGCCGCA CGCTCGGCGG ATGCAGTTCG ATCAATGGCC TGATCTACGT GCGCGGGCAG
AAAGAGGACT ACGACCATTG GGCCGCGCTC GGCAATCGCG GATGGAGCTG GGACGAATGC
CTGCCGTACT TCCGGCGGCT CGAGCACAAC CAACTGGGCG AGGGGCCGAC GCGCGGTGTC
GACGGGCCGC TGTGGGCGTC GACAATCCGG CAGCGTCATG AACTCGTCGA TGCGTTCGTC
GCGGCATCGA ACCGGCTCGG CGTGCGGACT GTCGACGACT TCAATACGGG CGATCAGGAA
GGCGTCGGCT ACTACCAGCT GACCACGCGC CACGGCTTGC GCTGTTCGAC AGCCGTCGCG
TATCTGAAGC CTGCGCGGCG CCGCGCGAAT CTGCACGTCG AAACGGAGGC GCAGGCGTCG
AAGATCCTGT TCGACGGCAC GCGCGCAACG GGCATTCAAT ACGTGCAGCA TCGCGAGACA
CGCGAAGTGC ACGCGGATCG CGAGGTGATA TTGACGGCGG GCGCGCTGCA ATCGCCGCAA
TTGCTGCAAC TGTCGGGCGT CGGTCCGGGG GCGCTGCTGC GCGAGCACGG CATTCCCGTC
GTGGCTGATC GCGCGGGTGT CGGCGAAAAT CTGCAGGACC ATTTGCAGGT TCGCCTGATC
TACGAAGTCA CGAAGCCGAT CACCACCAAC GACCAGCTTC ATTCATGGAC GGGCCGCGCG
AAGATGGGCC TGCAATGGGC GCTGTTTCGC GGCGGACCGC TTGCGGTCGG CATCAATCAG
GGCGGCATGT TCTGCCGCGC GCTGCCTGAC GAAGCGAAGA CGCCCGACAT CCAGTTCCAC
TTCTCGACGC TTTCCGCCGA TTCCGCTGGC GGCGACGTAC ACGCGTTTCC CGGCTGCACG
TATTCGATCT GCCAGTTGCG GCCCGAATCG CGCGGCGTGG TGCGTATCCG CTCGACGAAT
CCGCTCGAGG CGCCGTCGAT CCAGCCGAAC TATCTCGCGA CCGATCTCGA CCGGCGCACG
GCCGTCGCGG GCGTGCGCTT TGCGCGGCGC GTCGCCGCAA CGCAGCCGAT GGCCTCGCTG
ATGAAGCGCG AAGTACGGCC CGGCGCCGAC GCGCGGACGG ACGACGAACT GCTGCATTTC
TGCCGCGAGT ACGGACAGAC GATTTTCCAT CCGTCGGGCA CGGTGAAGAT GGGGACAGCC
GACGATCCGC TCGCCGTGGT CGACGAACGC CTGCGCGTGT ATGGCACGCG CGGGCTGCGT
GTCGTCGATT GCTCGATCAT GCCGACGCTC GTGTCCGGCA ACACCAACGT GCCGATCGTA
ATGGTCGCGG AAAAGGCGTC CGACATGATC CTCGACGACG CCCGCGCCCC TGGCCCTCAC
GAGCGCGTGA ACGCGCCGGT GGAAGCCGCC GCCTGA
 
Protein sequence
MPRRFDYVVV GAGSAGCVLA NRLSEDGRYS VCLLEAGPAD RYLWIHIPIG YGKTMFHPVY 
NWGFYTDADP NMNDRKLYWP RGRTLGGCSS INGLIYVRGQ KEDYDHWAAL GNRGWSWDEC
LPYFRRLEHN QLGEGPTRGV DGPLWASTIR QRHELVDAFV AASNRLGVRT VDDFNTGDQE
GVGYYQLTTR HGLRCSTAVA YLKPARRRAN LHVETEAQAS KILFDGTRAT GIQYVQHRET
REVHADREVI LTAGALQSPQ LLQLSGVGPG ALLREHGIPV VADRAGVGEN LQDHLQVRLI
YEVTKPITTN DQLHSWTGRA KMGLQWALFR GGPLAVGINQ GGMFCRALPD EAKTPDIQFH
FSTLSADSAG GDVHAFPGCT YSICQLRPES RGVVRIRSTN PLEAPSIQPN YLATDLDRRT
AVAGVRFARR VAATQPMASL MKREVRPGAD ARTDDELLHF CREYGQTIFH PSGTVKMGTA
DDPLAVVDER LRVYGTRGLR VVDCSIMPTL VSGNTNVPIV MVAEKASDMI LDDARAPGPH
ERVNAPVEAA A