Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6216 |
Symbol | |
ID | 6247770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 777428 |
End bp | 778810 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642597905 |
Product | major facilitator transporter |
Protein accession | YP_001862307 |
Protein GI | 186470989 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.178508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAGC ATACGAGGCG CGTGAAGACG CGTCACATCA TTCTGGCGGT CATGTGCGTG ATGTACTTCA TCTCATACAT CGACCGCGTG AACATCGCGG TGGCGGGTCC GCTGATCCGT CATGAGATGG GGCTGACATC GGCGGAACTC GGACTGGTGT TCTCAGCGTT CGCGTATCCG TACGCGATAA TGCAGATCAT CGGTGGATGG CTGTCGGATA AGTATGGTCC GAAGCTCGTG CTCACCGTGC TGTCGATCAT ATGGGGCGCA GCGACGCTCG CGACGGGCTT CGCGGGCAGT GTCGCGATGC TCGTCGCGCT GCGGTTCACG CTCGGCATCG GCGAAGGGGG CGCGTTCCCG ACAGCCACGC GCGCGTTCAC GTACTGGATG CCCGTATCGG AACGCGGGTT CGCGCAGGGC ATCACGCACA GCTTCGCGCG CCTGGGCGGC GCGGTGACGC CGCCGCTCGT GCTCGCCGTG GTCGCGGCGG GCGGCTGGCG CGACGCGTTC GTTCTGCTTG GCGTCGCGAG TCTCGCGTGG ACGGTGCTCT ATCTGTGCGT GTTCACCAAC TCGCCGGAGC AGAACAAGCG GATCACGCCG GAAGAAACGG CCGAAATTGG CTATCGCGTC GGTGACTGCG ATCGCGCGAA GCGCATGCCT ACGCCGTGGC GCAAGCTGAT TCGCCGGATG TGGCTCGTCA CGTTCGTCGA CTTCTGCTAT GGCTGGCTGC TTTGGGTGTA TCTGACGTGG CTGCCTTCGT ATCTGAAGGA ATCGCGCGGC TTCGATCTGA AGCACCTCGC GCTCTTCACG GCGCTGCCGC TGCTGGCGGG CGTGATCGGC GATACGCTCG GCGGCGTGGT GTCGGACAAG CTCTTCAAGG TCACGGGGCG CCTGCGCTTT GCGCGTTGCG CGGTGCTGGT GGTGGGTATG GGCGGGTCGC TTGCGTTCCT GCTGCCGATG GTGTCCGCCA GCAATCCGCT GACGGCCGTG TGGTATCTGT CGGCGTCCTT CTTCTTCCTG GAGATCACGA ACCCGGTGCT ATGGACGCTG CCGCTCGATA TCGCAGGCAA GTATGCGGGC ACGGCGGGCG GCATGATGAA CACGGGCTTC GGCGTCGCGG GGATGGTGTC GCCCGTGGTG TTCGGCTATC TGATCCAGAC GACGGGCAGC TACAACGTGC CGTTCTCGAT CTCCGCCGGG CTGCTGGCCG TGGGTGTGGT GGCCGCGTGT TTCATCGATA CAAGCAAGAC GGTCGAGGCC GACGAGGAAC GCGAACGCCT GCAAGGCGTG GAAGTCGGCG GCATGCCCGC GTTCGCCCAT GCGGCGTCGG GGCTGCGGCT CGAACGGCAT CACCTGCGTC GGCCGTTGCG CTGGCGCAAG TGA
|
Protein sequence | MEKHTRRVKT RHIILAVMCV MYFISYIDRV NIAVAGPLIR HEMGLTSAEL GLVFSAFAYP YAIMQIIGGW LSDKYGPKLV LTVLSIIWGA ATLATGFAGS VAMLVALRFT LGIGEGGAFP TATRAFTYWM PVSERGFAQG ITHSFARLGG AVTPPLVLAV VAAGGWRDAF VLLGVASLAW TVLYLCVFTN SPEQNKRITP EETAEIGYRV GDCDRAKRMP TPWRKLIRRM WLVTFVDFCY GWLLWVYLTW LPSYLKESRG FDLKHLALFT ALPLLAGVIG DTLGGVVSDK LFKVTGRLRF ARCAVLVVGM GGSLAFLLPM VSASNPLTAV WYLSASFFFL EITNPVLWTL PLDIAGKYAG TAGGMMNTGF GVAGMVSPVV FGYLIQTTGS YNVPFSISAG LLAVGVVAAC FIDTSKTVEA DEERERLQGV EVGGMPAFAH AASGLRLERH HLRRPLRWRK
|
| |