Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6175 |
Symbol | |
ID | 6247735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 728374 |
End bp | 730155 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642597870 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001862272 |
Protein GI | 186470954 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0659991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00257919 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATGCAT CGGATAACGA ATTCGTGCTC GTGGGAAGCC TTGAAGAGCT GAAGGCAAAG GGCCGACTCG TGGTGCAAGG CGGCCATCGC CCAATCCTGG TCATCTACGA CCGCGGGCGC GTCTTCGCCC TCGATAATCG TTGCCCCCAC ATGGGCTTCC CGCTCGAGCG CGGCACTGTC GACGACGGCA TCTTGACCTG TCATTGGCAC CACGCCCGCT TCGATCTGGA AAGCGGCTGC ACCTTCGATC TCTGGGCTGA CGATGTACCG GGCTGCGCGG TCGAGGTGCG CAACGGCGAC GTCTGGGTGA CGGCTACGTT CGGCCATGCC GATGCCGCAG CGCACTGGCA TCGGCGGCTT GCGGACGGCC TCGCACACGA CCTCGGACTC GTCATCGCCA AGGCGGTGCA TGGCCAGCTT GCGGCCGACG TACCCGTGGC CGACATCGTG CGGCAGATTG CGCTGTTCGG GGCGCAGAAC CGTGACGGCT GGGGTGTCGG TCTGACGATA CTGACGGCGC TGGCCAATCT GTTGCCCATG CTGCCAGCGG ACGACGTCTA TCTCGCCCTG TTCCAGTGCG CGCGTCGTGT AGCGGCGGAC TGCGATGGCG AGGCGCCGCG GCGGGAACGT ACGCCGCTTG GAAGCCGGCC GCAAGCAGCC GCGCTCCAGC GTTGGCTGCG CCTCTGGACA AACGTGCGCC ATCGCGAGGC CGCCGAGCGC ACCCTGTTGA CCGCGATTGC CGCAGATCTC CCGCCAGCCG TGCTGGCCGA CGCCCTGCTT TCGGCCGGGA CCGAACGGGC GTTCGCCGAC ACCGGTCATG CGCTCGACTT CGTCAACAAG GCGTTCGAGT GCCTCGACAT TATCGGCTGG CAGCATGCGT CAGCTTTGCT GCCAGCCGTC GTCGCCCAGA TGGTGGCCGC ACGCGGCGCC GACGAATCGA CCGCCTGGCG CCAGCCCGTT GATCTTGTTG CGCTGTGTGA CGAATCAGCC AGCCAGATTT CGCAACTTTT CGCAGCGGGA CGCAACTTGC GAGGTTGGTC GAACCACGCG GCACTCGCCC GGGAAATGCT CGGCGACGAT CCAGCGAAGA TCATCGATGC GCTGAAGACG GCGATCCGCG CAGGCGCCGC GCCTGCTGAC CTGGGACAAT CCCTCGCCTA CGCAGCGGCG CTGCGCGTGG CCCGCTTCGG CAATGCCAAC GAGCACGCCG ACTGGGAGAC GGCGCACCAC GTCTTTACTC ATGCCAACGC GGTCCACCAG ATGCTCAGGC GGATCGGGAC GGCCGGCATC GACGATTGCG TCACGACGGT CCGCGGCATA GTGCACGGCG CGATGGCGCT TTACCTTGCC CGATATCTGA ACGTGCCACC CGCCCGCATC CCGGGCGACG ACGACGATCG GCTCGACGAC CTTCCTGCCG ATGAGCAGAC GATCCGCACC GCCTTGCTCG ACGCCTTCGA CCGGCAGCGA CAGGTTGATC TTGCGGCAAG GCTGGTGGCG CGGCATCTCA CGCTCGGCCA TCCGCCACAG GCGCTAATCG CGACGCTTGC CTTTGCGGTG CTGCGCGAAG ATGCGGGCTT CCACGCCTAT CAGATGCTCG AGGCTGGCGT GCGGCAATTC ACTGCGTGGG GCAATTCGGG TGAGGGCCGG CATATTCTGA TTGCGGTCGC CCGCTATCTC GCGGCCCATT CGCCGACCGA GCGCGGGACG CTACAAACGG CCGACATCGC CCGGCGCTTG ATGCGGGGCG GCGAACTACA TCAGGGAGAT AGAGCGTCGT GA
|
Protein sequence | MDASDNEFVL VGSLEELKAK GRLVVQGGHR PILVIYDRGR VFALDNRCPH MGFPLERGTV DDGILTCHWH HARFDLESGC TFDLWADDVP GCAVEVRNGD VWVTATFGHA DAAAHWHRRL ADGLAHDLGL VIAKAVHGQL AADVPVADIV RQIALFGAQN RDGWGVGLTI LTALANLLPM LPADDVYLAL FQCARRVAAD CDGEAPRRER TPLGSRPQAA ALQRWLRLWT NVRHREAAER TLLTAIAADL PPAVLADALL SAGTERAFAD TGHALDFVNK AFECLDIIGW QHASALLPAV VAQMVAARGA DESTAWRQPV DLVALCDESA SQISQLFAAG RNLRGWSNHA ALAREMLGDD PAKIIDALKT AIRAGAAPAD LGQSLAYAAA LRVARFGNAN EHADWETAHH VFTHANAVHQ MLRRIGTAGI DDCVTTVRGI VHGAMALYLA RYLNVPPARI PGDDDDRLDD LPADEQTIRT ALLDAFDRQR QVDLAARLVA RHLTLGHPPQ ALIATLAFAV LREDAGFHAY QMLEAGVRQF TAWGNSGEGR HILIAVARYL AAHSPTERGT LQTADIARRL MRGGELHQGD RAS
|
| |