Gene Bphy_6175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6175 
Symbol 
ID6247735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp728374 
End bp730155 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content66% 
IMG OID642597870 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001862272 
Protein GI186470954 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0659991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00257919 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGCAT CGGATAACGA ATTCGTGCTC GTGGGAAGCC TTGAAGAGCT GAAGGCAAAG 
GGCCGACTCG TGGTGCAAGG CGGCCATCGC CCAATCCTGG TCATCTACGA CCGCGGGCGC
GTCTTCGCCC TCGATAATCG TTGCCCCCAC ATGGGCTTCC CGCTCGAGCG CGGCACTGTC
GACGACGGCA TCTTGACCTG TCATTGGCAC CACGCCCGCT TCGATCTGGA AAGCGGCTGC
ACCTTCGATC TCTGGGCTGA CGATGTACCG GGCTGCGCGG TCGAGGTGCG CAACGGCGAC
GTCTGGGTGA CGGCTACGTT CGGCCATGCC GATGCCGCAG CGCACTGGCA TCGGCGGCTT
GCGGACGGCC TCGCACACGA CCTCGGACTC GTCATCGCCA AGGCGGTGCA TGGCCAGCTT
GCGGCCGACG TACCCGTGGC CGACATCGTG CGGCAGATTG CGCTGTTCGG GGCGCAGAAC
CGTGACGGCT GGGGTGTCGG TCTGACGATA CTGACGGCGC TGGCCAATCT GTTGCCCATG
CTGCCAGCGG ACGACGTCTA TCTCGCCCTG TTCCAGTGCG CGCGTCGTGT AGCGGCGGAC
TGCGATGGCG AGGCGCCGCG GCGGGAACGT ACGCCGCTTG GAAGCCGGCC GCAAGCAGCC
GCGCTCCAGC GTTGGCTGCG CCTCTGGACA AACGTGCGCC ATCGCGAGGC CGCCGAGCGC
ACCCTGTTGA CCGCGATTGC CGCAGATCTC CCGCCAGCCG TGCTGGCCGA CGCCCTGCTT
TCGGCCGGGA CCGAACGGGC GTTCGCCGAC ACCGGTCATG CGCTCGACTT CGTCAACAAG
GCGTTCGAGT GCCTCGACAT TATCGGCTGG CAGCATGCGT CAGCTTTGCT GCCAGCCGTC
GTCGCCCAGA TGGTGGCCGC ACGCGGCGCC GACGAATCGA CCGCCTGGCG CCAGCCCGTT
GATCTTGTTG CGCTGTGTGA CGAATCAGCC AGCCAGATTT CGCAACTTTT CGCAGCGGGA
CGCAACTTGC GAGGTTGGTC GAACCACGCG GCACTCGCCC GGGAAATGCT CGGCGACGAT
CCAGCGAAGA TCATCGATGC GCTGAAGACG GCGATCCGCG CAGGCGCCGC GCCTGCTGAC
CTGGGACAAT CCCTCGCCTA CGCAGCGGCG CTGCGCGTGG CCCGCTTCGG CAATGCCAAC
GAGCACGCCG ACTGGGAGAC GGCGCACCAC GTCTTTACTC ATGCCAACGC GGTCCACCAG
ATGCTCAGGC GGATCGGGAC GGCCGGCATC GACGATTGCG TCACGACGGT CCGCGGCATA
GTGCACGGCG CGATGGCGCT TTACCTTGCC CGATATCTGA ACGTGCCACC CGCCCGCATC
CCGGGCGACG ACGACGATCG GCTCGACGAC CTTCCTGCCG ATGAGCAGAC GATCCGCACC
GCCTTGCTCG ACGCCTTCGA CCGGCAGCGA CAGGTTGATC TTGCGGCAAG GCTGGTGGCG
CGGCATCTCA CGCTCGGCCA TCCGCCACAG GCGCTAATCG CGACGCTTGC CTTTGCGGTG
CTGCGCGAAG ATGCGGGCTT CCACGCCTAT CAGATGCTCG AGGCTGGCGT GCGGCAATTC
ACTGCGTGGG GCAATTCGGG TGAGGGCCGG CATATTCTGA TTGCGGTCGC CCGCTATCTC
GCGGCCCATT CGCCGACCGA GCGCGGGACG CTACAAACGG CCGACATCGC CCGGCGCTTG
ATGCGGGGCG GCGAACTACA TCAGGGAGAT AGAGCGTCGT GA
 
Protein sequence
MDASDNEFVL VGSLEELKAK GRLVVQGGHR PILVIYDRGR VFALDNRCPH MGFPLERGTV 
DDGILTCHWH HARFDLESGC TFDLWADDVP GCAVEVRNGD VWVTATFGHA DAAAHWHRRL
ADGLAHDLGL VIAKAVHGQL AADVPVADIV RQIALFGAQN RDGWGVGLTI LTALANLLPM
LPADDVYLAL FQCARRVAAD CDGEAPRRER TPLGSRPQAA ALQRWLRLWT NVRHREAAER
TLLTAIAADL PPAVLADALL SAGTERAFAD TGHALDFVNK AFECLDIIGW QHASALLPAV
VAQMVAARGA DESTAWRQPV DLVALCDESA SQISQLFAAG RNLRGWSNHA ALAREMLGDD
PAKIIDALKT AIRAGAAPAD LGQSLAYAAA LRVARFGNAN EHADWETAHH VFTHANAVHQ
MLRRIGTAGI DDCVTTVRGI VHGAMALYLA RYLNVPPARI PGDDDDRLDD LPADEQTIRT
ALLDAFDRQR QVDLAARLVA RHLTLGHPPQ ALIATLAFAV LREDAGFHAY QMLEAGVRQF
TAWGNSGEGR HILIAVARYL AAHSPTERGT LQTADIARRL MRGGELHQGD RAS