| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6112 |
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| Symbol | |
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| ID | 6247677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 663139 |
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| End bp | 663624 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642597813 |
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| Product | Hcp1 family type VI secretion system effector |
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| Protein accession | YP_001862215 |
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| Protein GI | 186470897 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.24668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGG ATATTTTCCT GAAGATTGAT GGCATCGACG GTGAGTCGCA GGACGACAAG
CACAAGAACG AGATCGAAGT ACTGAACTGG AACTGGGAAA TCAGCCAGGA ATCGTCGATG
CATTCGGGCA GCGGCGGCGG CGCCGGCAAG GCGACGGTTG GCGACCTGTG GTTCCAGCAC
GGCATCGACC GTGCGAGCCC GAACCTCATG AAGTACGCGC TCACGGGCAA GCACATCGAC
CAGGCTGTGC TCGTCATGCG CAAGGCCGGC GGCAACCCGC TCGAATACCT CAAGATCACG
ATGAGCGACG TGCTGGTCAC GCGCGTGAAG CCGTCGGGCA GCAAGAACGG CGAAGAAAAG
AGCCTCGAGG AAGTGTCGCT GTCGTTCGCG AAGGTCAAGC AGGAATACGT CGTCCAGAAC
GCCCAGGGCG GCAGCGGCGG CGCCGTGACG GCCAGCTACG ACATCAAGGG CAACAAGGAG
GCGTAA
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| Protein sequence | MAQDIFLKID GIDGESQDDK HKNEIEVLNW NWEISQESSM HSGSGGGAGK ATVGDLWFQH
GIDRASPNLM KYALTGKHID QAVLVMRKAG GNPLEYLKIT MSDVLVTRVK PSGSKNGEEK
SLEEVSLSFA KVKQEYVVQN AQGGSGGAVT ASYDIKGNKE A
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