| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6110 |
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| Symbol | |
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| ID | 6247675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 661145 |
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| End bp | 662491 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597811 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001862213 |
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| Protein GI | 186470895 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.396717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGC ACAACAAGGT CGTCTGGAAT GAGGGGCTCT TCATGCGCCC GCAACTATTC
CAGCAGCAGG AGCGTTATCT CGAGCATTTC GCGCACAAGC GCGCGGCCCC CCTTTCGCCC
TTCTTCTTTG GCTTTACGCA CTACACCCTC GACACCGAGG CGCTCGCGCT CGGCAAGGTG
ATCGTGAAGT CCGTGGCCGG CGTTTTTCCG GATGGCACCC CTTTCGATGC ACCAGGCAGC
ACGCCCCCGC CCGCGCCGCT CACGATCCGG CCCGAGCATC TGGAGCAGCT CATCTATCTC
GCTGTGCCGA TCCGTGTCCC CAACGGCGAG GAAACGACTT TCGACAACGC GTCGGACTCT
CTCGCACGCT ACGCTGTGTT CAACACGGAC CTGCGCGACA CCAACTCGGT CGGTCAAGGT
TCACAGAAAA TCCAGCTGTC GAACCTGCGG CTGCGTCTCG TGCCCGAGAA GGAGATGACC
GATGCGTGGA TTGGCCTTGC GCTCACGCGC GTCAAGACCA TTCGCGCCGA CGGCAGCATT
GTGCTCGACG ACACCCTCGT GCCGCCTGTC TCAGCCTACG GCGCAAGCAG CCTGCTCGAG
AGCTGGCTTG CGAAAATCCA TGACCTCACC CGCCTGCGCG CCACGGCGCT CGCGCAGCGT
CTGACCGGTG CAGACGGCAA GGCCGGCACC GCGGCCGAGG TGTCGGACTA CCTGCTGCTG
CAGACACTCA ACCGCTACGA ACCGCTATTA CAGCATCTGC GGCGGGTGCC GACCACCTCG
CCTGCGGACC TGTACGCCCT GCTCATCAGC ATGGCGGGCG AGCTGTCAAC CTATGTCCGC
ACCACGACGC GGCGGCCGCT TGATTCGCAT CCGGCGTACC AGCACACGGC GCCCCATGTA
TGCCTGAAGC CCGTCGTCGA CGACACCCAC CAGTTGCTCA ACGCCGTGCT TGTGCGCAGT
GCGCAGAGCA TCGAACTGAC GGATACCGGC TACGGCATGC GCAATGCCGT GGTGGATCCG
GCGGAAATGC ATGGGTTCAC CTCGGTCGTG CTCGGGGTCA GCGCCGCGAT GCCGCCCGAT
ACGCTGCAGC AGCAGTTCGC TGCACAGGCC AAGGTCGGTC CTTCCGAACG CCTGCCTGAT
CTCGTGCGGG GTCACCTGCC AGGTATCACG CTGCAGGCAT TGCCGGTGCC ACCGCGGCAG
ATCCCGTTCA ATGCGGGCTA CATCTACTAC GAACTCTCAC GCGCCGGTCA GCTCTGGGAA
GACGTCGAAC GCCGTGGCGG TCTGGCACTG CACATCGCGG GGGACTTCCC GTCGCTGAAG
CTCGAATTGT GGGGCATTCG CGGGTAA
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| Protein sequence | MSWHNKVVWN EGLFMRPQLF QQQERYLEHF AHKRAAPLSP FFFGFTHYTL DTEALALGKV
IVKSVAGVFP DGTPFDAPGS TPPPAPLTIR PEHLEQLIYL AVPIRVPNGE ETTFDNASDS
LARYAVFNTD LRDTNSVGQG SQKIQLSNLR LRLVPEKEMT DAWIGLALTR VKTIRADGSI
VLDDTLVPPV SAYGASSLLE SWLAKIHDLT RLRATALAQR LTGADGKAGT AAEVSDYLLL
QTLNRYEPLL QHLRRVPTTS PADLYALLIS MAGELSTYVR TTTRRPLDSH PAYQHTAPHV
CLKPVVDDTH QLLNAVLVRS AQSIELTDTG YGMRNAVVDP AEMHGFTSVV LGVSAAMPPD
TLQQQFAAQA KVGPSERLPD LVRGHLPGIT LQALPVPPRQ IPFNAGYIYY ELSRAGQLWE
DVERRGGLAL HIAGDFPSLK LELWGIRG
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