| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6107 |
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| Symbol | |
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| ID | 6247672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 654398 |
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| End bp | 655630 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642597808 |
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| Product | DotU family type IV/VI secretion system protein |
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| Protein accession | YP_001862210 |
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| Protein GI | 186470892 |
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| COG category | [N] Cell motility
[S] Function unknown |
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| COG ID | [COG1360] Flagellar motor protein
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.513822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGA CAGCAGCTTC ACCACAACCG CGATACGAAG CCGAACCTGC TGCGCCGTAT
CGCGAACGCG TTCGCGCGGC CGAAGGCGCA GCCAATCCCC TGCTCGAAGC TGCTCGCCCA
CTGCTGGATG CACTCGCGAA TACGCCCGCC GAACTCGATG CAGCCGGCGT TGCCCAGCAT
CGGCTGTCAC TGGTACAGCA CCTCCGGATG TTCGGGAAAG TCTGCGGCGA ACTCAGGCTG
CCTGCGGAAC ACATCGAAAA GGCACAATAC TGCCTGTGCT CCGCATTGGA CGAAGCGGCC
GGGCTGACCG ACTGGGGCAA TGGCTCAAGG CTTGGCATGG ACTGGCGTGC AACGGGACTC
GCCACCACAT CGGGCTATGA CCGGCAAGGT GGCGACCGCG TCTACGCCAT CGCCACGGAT
GCCATGCACA ATCAGCGTGA AAATCGCTGC CTCATTGAAG TCATCCAGCA CATCCTCGAC
CGGGGATTCA GGGGCCGCTA CCGGTTCGCC AACGACAGCG ACCACCAGAT AGCGGTAGTG
CGCAAACAGG TCGATCAGGC CGTCGTCACC TCCGGACACT CTCCTCCAGT GTCCGGTGAA
CACATGCTGA CAACGGGGGG CGCGCCCCCG GTCTATCACC TGCGGGTCGA GGCGCAGCCG
CTATCGCAGG CTCCGCGGAA ATCGCGGCGC TGGATGGCTA TCGGTGCGTT ATGCCTCGTT
CTTCTCGCTG GCGCCGCCGT AGCAGGGTAC TGGCGTTACA CGAAGGTCAG GCAGGCCGAG
CCCCCTGTGT CGCCAATCGA TGCACTGGCA GGCAGGCTCG CCGGCCACCT CGCGGACGAA
GTGAATGCGG GCACCGTCAC CCTGGCAGAA AATGCCCAGC ACACCACGCT CTCCCTCCGG
CTCGAGGGCA TCTTCGAGGC CGGACAGTCG AGTGTCAATC CGTGGGTCAA GCCCTTGATC
ACCACCATCG GGCAGGAAGT CGCGAAAACT CCCGGAAGGG TCCTCGTCAC GGGCCATACC
GACAGCCAGC CTTTCTCCCA TATGCAACGC AGCTCCAACC TGGCACTGTC CGATGCGCGC
GCACAGGAGG TTGCACAGAT TCTGGTCTCC GCCGGCGTGG CTACCGATCG CATCGACTCG
ACCGGAAAGG GTAACGCAGA GCCGGCTGCC GACAACGCGA CACCTCAGGG CAGACTGAGA
AATCGCCGTG TCGAGATCAC CGTATTCGAG TAG
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| Protein sequence | MSATAASPQP RYEAEPAAPY RERVRAAEGA ANPLLEAARP LLDALANTPA ELDAAGVAQH
RLSLVQHLRM FGKVCGELRL PAEHIEKAQY CLCSALDEAA GLTDWGNGSR LGMDWRATGL
ATTSGYDRQG GDRVYAIATD AMHNQRENRC LIEVIQHILD RGFRGRYRFA NDSDHQIAVV
RKQVDQAVVT SGHSPPVSGE HMLTTGGAPP VYHLRVEAQP LSQAPRKSRR WMAIGALCLV
LLAGAAVAGY WRYTKVRQAE PPVSPIDALA GRLAGHLADE VNAGTVTLAE NAQHTTLSLR
LEGIFEAGQS SVNPWVKPLI TTIGQEVAKT PGRVLVTGHT DSQPFSHMQR SSNLALSDAR
AQEVAQILVS AGVATDRIDS TGKGNAEPAA DNATPQGRLR NRRVEITVFE
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