| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6089 |
|---|
| Symbol | |
|---|
| ID | 6247656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 631953 |
|---|
| End bp | 632615 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642597792 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001862194 |
|---|
| Protein GI | 186470876 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.567135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC CCGATCTGCT CGCACGCTGC ACCGCCTATC TGCCGCAGTT GCTGGACGGC
GCACTGACAA CGTTGTGGCT GTCGGCGGCC GCCGTGTTCT GCGGCTTCTT TGCCGGCCTC
TTCATCTACA CGATGTCGGC AAGCGACAGC CCGCTGCCCG CGGGCGCCGC GCGGGTCTAT
GTCAGCGTGT TTCGCGGCAC GCCCGTGCTC GCGCAACTGC TCGTGATGTA TTACCTGCCG
TCGGCGCTCG GGCTCGCGTT GCCAGGCATC GTCGCGGCGG CCATCGGGCT GTCGATGAAC
ACGGCTGCGT ATCAGTCGCA GATTCTCGGC GCGGGCTTTC GCTCGATCGC CCGCGGTCAG
ATCGAAGCCG CCGTCACCTT CAATCTCACG CGGCGTCAGG TGCTGTGGCA CATCGAAGTG
CCGCAGGTGG TGCGGGTCAC GCTGCCCGCG CTCGTGTCGG AGATGATCGA TATCGTCAAG
GCATCGGCTG TGGTGTCTGT GATATCCGTC ACGGACCTGA TGCGCGTCGG CCAGCAGTTG
TCGTCGTCGA CGTACCGGCC GCTCGAAGTG TACACGTGCG CCGCCCTCTT CTATCTGGCC
ATCACGACGC TGCTTTCATT CGCCGCGCAT TGCTACGAGC GCCGCGCGGC GTCGCGCGCA
TGA
|
|---|
| Protein sequence | MNAPDLLARC TAYLPQLLDG ALTTLWLSAA AVFCGFFAGL FIYTMSASDS PLPAGAARVY
VSVFRGTPVL AQLLVMYYLP SALGLALPGI VAAAIGLSMN TAAYQSQILG AGFRSIARGQ
IEAAVTFNLT RRQVLWHIEV PQVVRVTLPA LVSEMIDIVK ASAVVSVISV TDLMRVGQQL
SSSTYRPLEV YTCAALFYLA ITTLLSFAAH CYERRAASRA
|
|---|
| |