| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6088 |
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| Symbol | |
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| ID | 6247655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 631272 |
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| End bp | 631937 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597791 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001862193 |
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| Protein GI | 186470875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.339647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAACC TGCTCGCTCT CGTTCCACGC TTCGCCGACG CGATGCTCGT CACACTCGAA
GTCAGCCTGA TTGCGGCTGT GCTCGGCATG GGCGGCGGCT TCGCACTCAA CGGGTTGCGC
CTGCGTTACG CACGCGTGCT CGCCGCGCCC TATCGCGTGT TCGTCTGGCT GATTCGCGGC
ATGCCGTATC TGTCGCAATT GATGATCGTC TACTTCGGGC TGCCCGCTTT CGGTATCACG
ATGACGGCCG TGCAAGCGAC GGTCGTGTCG CTCGCGATCT ATGCGAGCGC GTATTTCGCG
GAGATCTTTC GCGCTGCATG GGCCAGCGTG CCGCGCGGTC AGATCGAGGC CGCTCAGGCG
TTCGGCGTGA GCCGCTGGGC CGCGTTCCGC GCGATCGAAC TGCCGCAGGC GCTCGCCTTC
GCGGTGCCGC TGCTCGCGAA CCAGATCATT CTCGTCATCA AGGAGAGCGC CGTGGCATCC
GTCATCACGG TCCCCGAGCT GACGATGACG GCCAGCGACA TCGTCGCCTC CACTTACACC
TACGTCGGTC CCTATACGCT GCTGATCGTG AGCTACTGGC TGCTCACCCA GGCCGTGTCG
CTGCTCGTGC AGCGCGCGAC GGCGATGATC CCTTTCCTGC AGAACGCCAC GAATCAAGCT
ACATGA
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| Protein sequence | MDNLLALVPR FADAMLVTLE VSLIAAVLGM GGGFALNGLR LRYARVLAAP YRVFVWLIRG
MPYLSQLMIV YFGLPAFGIT MTAVQATVVS LAIYASAYFA EIFRAAWASV PRGQIEAAQA
FGVSRWAAFR AIELPQALAF AVPLLANQII LVIKESAVAS VITVPELTMT ASDIVASTYT
YVGPYTLLIV SYWLLTQAVS LLVQRATAMI PFLQNATNQA T
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