| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6085 |
|---|
| Symbol | |
|---|
| ID | 6247652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 628442 |
|---|
| End bp | 629158 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642597788 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001862190 |
|---|
| Protein GI | 186470872 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3665] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.195869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA CCGCCACCGA CTCGCATACA CACACGCATG CCCACCCGGG CGACGACAAC
GGGACGGAAC TCGGCCAGAA CGCCACCCTG CACGAACCCA TTTCCGCCGA TGGCACACCC
GAGCCCGGCA AGACCTACAC GGTGCCCGCG CGCTGCGGCC GCGCCGTGCG CGTCAAGGCG
GGGCAAACCA TCCGCATTTC GAACCCGCAC GGCACGCAGG TCTGCGATAC ATGGATCTTC
AATGCCACGC ACCTGAACGA ATTCCTCTCG TTCGAGCACA CGCGGGCGTA TATCGACAAG
ATCATTCCGC AGCCGGGCGA CCCGCTCGTG ACGAATCACC GCCGCCCGAT CGCCGAACTG
GTCGCCGATA CATCGCCGGG CGTGCACGAT ACGCTGATCG CCGCCTGCGA TCTGTACCGC
TACCAGAATC TGGGGGTGGA GCGTTATCAC GACAACTGCG CGGACAATCT GCGGCTGGCG
TTGAAGGCGA TCGGCATGCG CACGCGGGAA GTGCCGCAGC CGTTCAACCT GTGGATGAAC
ATCCCCGTCA AACCGGATTA CACGATCGAA TGGCTGGCGC CTGTATCGAA AGCGGGCGAC
CATGTGGACA TCAAGGCTGC GATGGATTGC ATCGTGGTGA TGTCGGCGTG TCCGCAGGAT
ATCATTCCCA TCAACGCACT CAACCCGGTC GAAGTCGAGT TCACGGTTCT CGCCTGA
|
|---|
| Protein sequence | MSTTATDSHT HTHAHPGDDN GTELGQNATL HEPISADGTP EPGKTYTVPA RCGRAVRVKA
GQTIRISNPH GTQVCDTWIF NATHLNEFLS FEHTRAYIDK IIPQPGDPLV TNHRRPIAEL
VADTSPGVHD TLIAACDLYR YQNLGVERYH DNCADNLRLA LKAIGMRTRE VPQPFNLWMN
IPVKPDYTIE WLAPVSKAGD HVDIKAAMDC IVVMSACPQD IIPINALNPV EVEFTVLA
|
|---|
| |