Gene Bphy_6078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6078 
Symbol 
ID6247645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp621888 
End bp622460 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content64% 
IMG OID642597781 
ProductTetR family transcriptional regulator 
Protein accessionYP_001862183 
Protein GI186470865 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0977252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAT CCAAAGCCGA GACCGCCGAT ACCCGGCGCC GCATCGTCGA AGTCGCGGCG 
CGCGAGTTCA GGGCCAACGG CATCCAGACA ACTGGACTCG CGGACCTGAT GTCGGCAGCA
GGCCTCTCTC ACGGCGGCTT TTACAGGCAT TTCGAGTCCA AGGACCAGTT GGTTGCCGAA
GCCTGCGAAG CGGGTCTTGC CGCCATCATT GCGAAGCTCG AAGCCGCTGC AGGCGAAAGC
GCCGGCAAGG AAGGCTTCGA TGCCATTGTC GATGCGTACG TGTCAGCCTC GCATCGCGAT
GCGCCTGCCG ACGGTTGCCC CCTCGCCGGG ATGGGCAGCG AACTGGCTCG CGCCGATGAC
GCAACGCGTG AAGCAGCCGC GAAAGGCTTC GACGATCTTG TCGGCGTACT CGCGAAGCGC
AGCAGTCGGC GGCGCAAGGA AGCCGCGCAT GCCGAAGCGG TGTTCGCACT GTCGGCCATG
ATCGGCGCCG TCACGATGGC GCGCGTCGTT CAAGACCCTG ATGCTTCCGC CAACATTCTT
CGCGACGTCA GGCATCACCT GAACGCGATG TAA
 
Protein sequence
MRKSKAETAD TRRRIVEVAA REFRANGIQT TGLADLMSAA GLSHGGFYRH FESKDQLVAE 
ACEAGLAAII AKLEAAAGES AGKEGFDAIV DAYVSASHRD APADGCPLAG MGSELARADD
ATREAAAKGF DDLVGVLAKR SSRRRKEAAH AEAVFALSAM IGAVTMARVV QDPDASANIL
RDVRHHLNAM