| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6051 |
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| Symbol | |
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| ID | 6247621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 596392 |
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| End bp | 599337 |
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| Gene Length | 2946 bp |
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| Protein Length | 981 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642597757 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001862159 |
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| Protein GI | 186470841 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000761227 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGGCG TTAAATGGGC GCTTCTTGAT CGGTTGACCG GTTTGGCTTT TCACCGGTTC
TCTGTCTTTA TAGCGCCTTT CGTGATTGCG CTCGGCAGTA TCGCCGTCAT GCTCTGGGAG
CCGCATCAGT TCGATATGGG CGGAACGGTG CGACTTACCT TTCCCGTTAT AGCGGATTCG
TCGGCGTCGC TGTCGCCCGC CAATGCCATC GTTCGTCTGC GCGACGCCGC GCCCACTGCG
CGTTTCAGTA CCCATCTCGC AGAGACGCCC TTCTGGTTCA TGCTTACCAC GCCTGACGCG
ACCCGCGAAG AGCCTGCCTA CATTGACCTG CCGTCGCGGC ATGCACAGAC GCTATCTTGT
TGGCGCGCGG GCGCCAGCCT TACGTTGCTC GGCGCGGGCG ACCGTCATGG AACCAGCGGC
AAAGTTCGTT CCAACAAGGC AGGCTTTGCA CTCCGCGTTG ACGACGCCGT TCCTCATGCA
CCGATCCTGT GCCGGGCCAC ATTCTCCGGC CCCGCCTATA TCACTGCGTC CGTGTCGAAC
GAGGACACGC TCGAGACTAC CGCCCTCGAT TTCCACCAAA GCGCGGCGTT GATCACGGGC
GGCCTCCTGA CGCTTGCAAT CTTCGTGTTC GTCACTGCCA TCATCAATCG CGAATGGACG
TACGTGATTT TTGCCGCATG GCTTGTCGGC AATCTACGGC TGAGCGCCAA CGCCATGGGC
TTCGATACAG AATGGCTAGG CCGCATCGTC CCGCCCGATC ATATCGCCTT CCTGCGGGAA
TTCACCTTCG CCGCCTATTA CCTGCTAACC ACGACATTGT TTGTCGAACT GTTCCGCCGC
GAACTTAAGG CAATCGGCCT GCGCTGGAGC CTTCACGCGG TCCGGTATGG CGGCTGCGTG
CTGATGGCCG CCGCCTTCGT TCTGGATTAC AGGCACTTCA TCCCGGTACT ATGGATCAGC
GCCAGCTTCT GCATACTGGT GCTTACGTAC TTTCTGTTCC AACTGGTCGT CAAGGCGCGC
TCGCGGACTG TGCTCTGGTA CGTCGCGTCA ATGGGCATCG TGCTGATCGC AACGCTCTCG
GAGGTGCTCG CGGCCGCGTT GGGTCTCAAA GCGCTAGAGG GCAAACTTAG TCCGGTGGTA
ACAGCCCTCT CGTCGAGTAT GCTGTGCGCG TTCGCGATTG CGGAACGTAT GCGCGAAGAG
CGCGAACGAC GCCGTGAAAT GCAGATCGAA CTGCGCAACA CATATGACGT TACCCCAATC
GGCCTCTTCA CGCTGAACGC GGACAACTGT TTTGTCCGCG CGAACCCAGC TCTACACACG
ATGTTGGGGC TGCCTCTGGA GCACTATGTC ACGCATCGCT GGGCCGACTA TTTTGCTCCG
GGCGCCGAGG GCGACTTGTA TGATCTGCTG GAGCGCGATG AGTCGGCATC GATCGAGATC
GACGGCGCAG CCGGCACGAG GGCGGACGGC CGACGCTATT CGCTGCGGGC GATCCGCGCG
AACGGGTTTA TCGAAGGCTC ACTGGAAGAT GTGACGGACC GCTCGAAAGC GATAGCGCGT
CTGCATTTCC TCGCCGAGCA CGATCCCCTC ACCGGCCTCC TCAACCGTCT GGGTATCGAA
CACGCCATCG ACCGTCAAAG CAGCCAGAAC GGGCCATGGG CGCTTGCGTA CCTCGATCTG
GACCGCTTCA AGGTGTTCAA CGATCTGTTC GGACACGGTA CGGGGGATGA AATATTGCGA
CATGTCGGCG CCCGTCTGGT TGAGCGTCTC GGCCCCCACG TTCCCATCGG TCGGATCGGC
GGTGACGAGT TCGTCTGCGT GCTCTCGAAC ATGACCATTG ACGAAGCGAT TGCGAGGTGT
CGAGAAATTG TCGATGCATT AAACTCCGCC CCGGTTCCTG TCAACACGCG TGCGTTTCAG
GTCAGGGGGT CCATTGGCGT GGTCGAATGC ACGGAAGGTG AACGGGTTCT CGACGCCCTC
GCTTATGCCG ACCGCGCGTG TCGCGCTGCG AAACGCGGCG GCAGTGCGCG GCTCGTCGCA
TTGCGCAGGG GGGCGCCGGC ATTCGAGGAG CGCACCGCCG AGATCAATCT GATTGAAGCG
CTCGGGCAAC GCCGGTTGCC TGAGGGATTG TTCCTCGTGA TGCAACCGAT CATGTCGATG
CGCGAACCAA CGCAAGCACT CGATTTCGAG GTGCTACTGC GCATGCGTTC GCCGGACGGC
GCAGTCGCGA CAGCCGGGAA GCTGATTGCT GCCGCGGAGG ACTCCGGCAC CATTGTGGAA
ATCGATCGCT GGGTGCTCTC GACGACGCTC GCATGGCTCA GCGACAATCG CGCGTCGCTT
ATCAACACCC GGTTCGTGTG TGTGAACCTG AGCGGCGGTT CGCTCAACGA CGAGCACTTT
CTCGGCGAGC TGTTTGACCT CCTCTCGCGT TACGAAGACG TCGTCCATTT GCTTTGTATC
GAAATCACCG AAAGTGTCGC GCTACACGAT CTCGAGCATA CGGAGCGCTT TATTGCGCGC
GTTCACGACA TGGGCGCAAA GATTGCGATC GACGATTTCG GTGCGGGCCA CACATCGTTG
CGCTACCTGA AGAAACTGTC GGCCGACGCA CTCAAGATCG ACGGCGAATT CGTGCGCACG
ATGTGTAATC ATCCGGCCGA CATTGCGATC GTCGAAGCGA TGATCAGCCT CGCACACAAT
CTCGGCATGC GAAGCATTGC GGAGTGGGTG GAAGACCTGG AGACCTTACG TGCGCTGGAT
GAACTCGGCG TCGACTACGT GCAGGGCTTT GCGATCGCAA AGCCGCAGCA GACGGACGCC
ATTCTTGCGG CGTCTTGTGC TGCGAGCTTC GTGACGAACA CCGAGATCAC GCATTATCTG
CAGACGGAGA GAACGGAGCA GCGAGGCGCC GGCGAACTTC GTGTGGAACG GGAAGGCACA
GTTTAA
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| Protein sequence | MTGVKWALLD RLTGLAFHRF SVFIAPFVIA LGSIAVMLWE PHQFDMGGTV RLTFPVIADS
SASLSPANAI VRLRDAAPTA RFSTHLAETP FWFMLTTPDA TREEPAYIDL PSRHAQTLSC
WRAGASLTLL GAGDRHGTSG KVRSNKAGFA LRVDDAVPHA PILCRATFSG PAYITASVSN
EDTLETTALD FHQSAALITG GLLTLAIFVF VTAIINREWT YVIFAAWLVG NLRLSANAMG
FDTEWLGRIV PPDHIAFLRE FTFAAYYLLT TTLFVELFRR ELKAIGLRWS LHAVRYGGCV
LMAAAFVLDY RHFIPVLWIS ASFCILVLTY FLFQLVVKAR SRTVLWYVAS MGIVLIATLS
EVLAAALGLK ALEGKLSPVV TALSSSMLCA FAIAERMREE RERRREMQIE LRNTYDVTPI
GLFTLNADNC FVRANPALHT MLGLPLEHYV THRWADYFAP GAEGDLYDLL ERDESASIEI
DGAAGTRADG RRYSLRAIRA NGFIEGSLED VTDRSKAIAR LHFLAEHDPL TGLLNRLGIE
HAIDRQSSQN GPWALAYLDL DRFKVFNDLF GHGTGDEILR HVGARLVERL GPHVPIGRIG
GDEFVCVLSN MTIDEAIARC REIVDALNSA PVPVNTRAFQ VRGSIGVVEC TEGERVLDAL
AYADRACRAA KRGGSARLVA LRRGAPAFEE RTAEINLIEA LGQRRLPEGL FLVMQPIMSM
REPTQALDFE VLLRMRSPDG AVATAGKLIA AAEDSGTIVE IDRWVLSTTL AWLSDNRASL
INTRFVCVNL SGGSLNDEHF LGELFDLLSR YEDVVHLLCI EITESVALHD LEHTERFIAR
VHDMGAKIAI DDFGAGHTSL RYLKKLSADA LKIDGEFVRT MCNHPADIAI VEAMISLAHN
LGMRSIAEWV EDLETLRALD ELGVDYVQGF AIAKPQQTDA ILAASCAASF VTNTEITHYL
QTERTEQRGA GELRVEREGT V
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