| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6049 |
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| Symbol | |
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| ID | 6247619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 592517 |
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| End bp | 594151 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597755 |
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| Product | levanase |
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| Protein accession | YP_001862157 |
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| Protein GI | 186470839 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0213879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000000502192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGATAAGAC GACATTCGAT GCACGACTCG CAACACCGAT TCTTCTTCAG CTCGCGCGTG
CTGTCGTCGT GGCTCTTTGC CGCGCTGGCC GCCGTCACCG CATGCGTGCC AACCTCTTCG
TCCCTTGCCC AGAGCGCGGC GGACACGCCG CAATGGCGCT CCGCGCTTCA CTACACGCCA
CAACGTAACT GGATGAACGA CCCCAATGGC CTCGTCTACT ACAAGGGGCT GTATCACCTG
TTCTACCAGT ACAACCCGCA CGGCAACTTC TGGGGCGACA TGTCGTGGGG ACACGCGACA
AGCCGCGACC TGATTCATTG GGATGAGCAC GCCGTCGCTC TGCGCGCAAA CCAGACCGAG
GAGATCTTCT CCGGTTCAGT CGTCGTCGAT GCCCGCAACA CGTCCGGGCT CGGAACGGCA
AAGAGGCCGC CGCTCGTCGC ACTCTATACG AGCGTCTATA AGGCGGGCTC CCGTCATGAA
GCTGGTGTGC AGGCGCAGTC AATTGCATAC AGCACCGATG ACGGCATGAC GTGGCAACCG
TACGTGCACA ACCCGGTATT GACGCTAAGT CCCGAGTCAA AGCAGTTTCG TGATCCGAAG
GTGTCCTGGT TCGCGCCTGG TGGCTACTGG CTGATGGCCA CCGTTGTCGC CGATGCGCAA
GTCGTCAAGT TCTACCGGTC CGACAATCTG ATCGACTGGA CGTTTCTGAG CGACTTCACG
CTGCCCGATG TGCCGCATCG GGGCGCGCTG TGGGAAATGC CAGACCTGTT CGCGCTGCCA
CTCGACGGCG ACCCGTCACG GCCGAAGTGG GTGATGATTG TCAACGTGAA CCCGTGGTCG
ATCGCGGGTG GATCGGGCGC AATGTATTTC GTCGGGCAGT TCGACGGCAC GCGCTTCGTA
GCGGACGACG TAGTGCCCGC CAGCTCCGAT CCCGCGCGGT ACCAGTGGCT CGATCATGGC
GCGGACTACT ATGCGGCAGG GACGTTTTCG AACGCGCCGT CCGGCACGGC TGTGACGATC
GGCTGGATGA GCAACTGGGA TTACGCGAGC CACGCGCCGA CCGCGCCCTG GAAAGGCGCG
ATGGCATTGC CGCGCGAACT CGCGCTGAAG ACGATCGACG GCAGGCCGCA ACTGACATCG
GTGCCGCCGT CATCGTATGT GTCGATGGTG AAGCAGCGCC CCGCCACGCG CATCGACGCA
TTCGACGTGT CGTCGGCCGC GCGCGACCTT GCGCCATCGG CGCGTGGCGC CGTGCAGAAC
ATCGATCTCA CCATCCGGCC CGGCACGGCA CATCGCGCCG GTCTGATCGT GCGAGCTTCG
GCAAATGGTG ACGTAGGTAC GCGAATCTTC TACGACACCA GCACGCAGAC GCTGAACCTG
GACCGGTCGC GTTCGGGCAA CACATGGTTT TCGGGCGCAT TCAGCAAAGC ACACATTGTC
AATCTTCCGT TGCACGACGG CAGGCTTGAT CTGCAGGTGG TGATCGACCG CAATTCGGTT
GAGGTGTTTG CCGATCACGG TCGCACGGTC ATCACGGACC TGATCTTCCC GGCACCCGGC
GACGATCATG TCCGCGTTTT CGCGGAAGGC GGCGATGCCA GATTCAGTGA CGTCGCGATT
ACGGACATGG ATTGA
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| Protein sequence | MIRRHSMHDS QHRFFFSSRV LSSWLFAALA AVTACVPTSS SLAQSAADTP QWRSALHYTP
QRNWMNDPNG LVYYKGLYHL FYQYNPHGNF WGDMSWGHAT SRDLIHWDEH AVALRANQTE
EIFSGSVVVD ARNTSGLGTA KRPPLVALYT SVYKAGSRHE AGVQAQSIAY STDDGMTWQP
YVHNPVLTLS PESKQFRDPK VSWFAPGGYW LMATVVADAQ VVKFYRSDNL IDWTFLSDFT
LPDVPHRGAL WEMPDLFALP LDGDPSRPKW VMIVNVNPWS IAGGSGAMYF VGQFDGTRFV
ADDVVPASSD PARYQWLDHG ADYYAAGTFS NAPSGTAVTI GWMSNWDYAS HAPTAPWKGA
MALPRELALK TIDGRPQLTS VPPSSYVSMV KQRPATRIDA FDVSSAARDL APSARGAVQN
IDLTIRPGTA HRAGLIVRAS ANGDVGTRIF YDTSTQTLNL DRSRSGNTWF SGAFSKAHIV
NLPLHDGRLD LQVVIDRNSV EVFADHGRTV ITDLIFPAPG DDHVRVFAEG GDARFSDVAI
TDMD
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