Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6039 |
Symbol | |
ID | 6247609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 581788 |
End bp | 582975 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642597745 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_001862147 |
Protein GI | 186470829 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.292434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00935557 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAACC CTCCCTACAT TTCGTTTTCG GGCGTGAGCA AATCGTATGA CGGCGCGCAC TTCGTCGTCG ACGATCTGAA CCTCGACGTA CGCAAGGGCG AATTCCTGTC GCTGCTCGGG CCGTCGGGTT CAGGCAAGAC GACCACGCTC ATGATGCTCG CAGGCTTCGA GGGGCCGACG CAAGGCGAGA TTCGACTCGA CGGACGCCGG CTCGACGACA AGCCGCCGCA TCTGCGCGAC ATCGGCATGG TGTTCCAGAA CTATGCCCTC TTCCCGCATA TGACGATTGC GGAGAACGTC GCATTTCCGC TTTCGGTGCG TCATGTGAGC CGCGCCGAAC AGAAATCGCG CGTGCAACGC GCACTCGATA TGATCGAGTT GCCTCATCTC GCGAATCGCC GTCCCGCACA ACTTTCCGGC GGACAGCAGC AGCGGGTTGC GCTCGCGCGA GCGCTCGTCT TCGAGCCGAG CGTCGTGCTG ATGGATGAGC CGCTCGGCGC ACTCGACAAA CGCCTGCGCG AAACGATGCA ATACGAAATC ATGCGGCTGC ATCGCGAACT CTCGCTGACG ATCGTCTACG TGACGCACGA TCAGGCGGAA GCGCTGACCA TGTCAGACCG TGTCGCGGTG TTCTCCGATG GCCGCATCCA GCAGGCGGCG ACACCGAGCG AGCTATATGA GAATGCGCAG AACGCGTTCG TCGCGAACTT CGTCGGCGAG AACAATGGGC TGACGGGGCG CGTCGTCGAC GTGAGCGACG ATCGCGCCAC CCTCGCGCTT GCGGACGGCA GCATCATTCG CGGCCGTTGC GAAAGCGGTC TGCGCGAAGG CGATGAAGCG ATGCTCGCGT TGCGCCCCGA ACGCGCGCAT ATTCCCAGCG CCGAAGGCAC GCACGCCGAC GGTCACAGCA ACGTGGTGCG CGCCCGTGTC GAAGAGCTGG TGTATTGCGG CGATCATCAT CGCGTCCATC TGAAGCTCGG CTCGCGCGAC GCCATCGTGG TGAAGGTTCC CAATACGCAG CGCCACGCGC TGCCCTCTCC TGGCGATACG GTCGAAGTCG CGTGGCGCCA CGACGATTGC AAGATTCTCG CAATGACAGC CAGCGCGCTG CGCAGCGCGC CCGCGAACTA TTCCTCGACG TATCCCATAC CTTCCATCAT GACGACCGCA CCCGCAGGAG CCAACTGA
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Protein sequence | MSNPPYISFS GVSKSYDGAH FVVDDLNLDV RKGEFLSLLG PSGSGKTTTL MMLAGFEGPT QGEIRLDGRR LDDKPPHLRD IGMVFQNYAL FPHMTIAENV AFPLSVRHVS RAEQKSRVQR ALDMIELPHL ANRRPAQLSG GQQQRVALAR ALVFEPSVVL MDEPLGALDK RLRETMQYEI MRLHRELSLT IVYVTHDQAE ALTMSDRVAV FSDGRIQQAA TPSELYENAQ NAFVANFVGE NNGLTGRVVD VSDDRATLAL ADGSIIRGRC ESGLREGDEA MLALRPERAH IPSAEGTHAD GHSNVVRARV EELVYCGDHH RVHLKLGSRD AIVVKVPNTQ RHALPSPGDT VEVAWRHDDC KILAMTASAL RSAPANYSST YPIPSIMTTA PAGAN
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