| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6024 |
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| Symbol | |
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| ID | 6247594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 565973 |
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| End bp | 566806 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642597730 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001862132 |
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| Protein GI | 186470814 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0667922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.533551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACC AGTACGCCGT GATCGGCAAT CCGATCGGAC ACACCAAATC GCCCCTGATT
CATGGACTCT TCGCAGAGGA GACGCAGCAG GACATGGCTT ATACGGCCAT CGAAGGGCCG
CTCGAACCCG AGCAGGCTTT TGCCGAGAGG GTTCGCGCGT TCGCCCTGGC GGGTGGCAAG
GGAATGAACG TCACCGCGCC CTTCAAGCTA AAGGCCTTTG CGATGGCCGA CGAACGCAGC
GAGAGAGCGG AGCTTGCGGG CGCCGTCAAC GCGATGAAGT TCGAGGGTGG CCGCATCATT
GCCGAGAACT TCGACGGCAT CGGGCTCGTG CGTGATATCG AGGTCAATCT CGGCCTGCCG
ATGGCGGGCA AGCGGGTGCT GCTGCTCGGC GCGGGCGGCG CCGCGCGCGG CGCGCTGCTG
CCTTTTCTGG CGGCGCGGCC AGAAAGCCTG GTGATCGCCA ATCGCAATGT CGCGAAAGCC
AGGGATCTCG CGGCGCAGGT CGGCGCGCAT GGCGCGCTTC ACGCCTGCGG TTATGGCGAT
CTGCAAGCAC TGGGGCGATT CGACCTGGTC GTGAACGCGA CGTCGGCGAG CCTCTCGGGC
GACCTGCCGC CCGTTCCTCC CAGCGTCTTC AGTCCTGAGG GCGCCGCCTA TGAACTTGCC
TATGGGAAAC GTTTGACGCC ATTTCTGCGG CTTGCACGCA ACGCGGGCGT ATTCACCATC
GCGGATGGCG TGGGCATGCT GGTCGAACAG GCGGCGGAAG CCTTCGACTG GTGGCGCGGC
GTTCGGCCTG CAACGCGGGC GGTGATCGAG CGGCTCACGG TGCCGCTCGA ATGA
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| Protein sequence | MTDQYAVIGN PIGHTKSPLI HGLFAEETQQ DMAYTAIEGP LEPEQAFAER VRAFALAGGK
GMNVTAPFKL KAFAMADERS ERAELAGAVN AMKFEGGRII AENFDGIGLV RDIEVNLGLP
MAGKRVLLLG AGGAARGALL PFLAARPESL VIANRNVAKA RDLAAQVGAH GALHACGYGD
LQALGRFDLV VNATSASLSG DLPPVPPSVF SPEGAAYELA YGKRLTPFLR LARNAGVFTI
ADGVGMLVEQ AAEAFDWWRG VRPATRAVIE RLTVPLE
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