| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5982 |
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| Symbol | |
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| ID | 6247553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 513996 |
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| End bp | 515765 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642597689 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001862091 |
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| Protein GI | 186470773 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTG ACATGGCGCC CGACGACATC CTGCAATACT ACAAACGCGA ACTGTCGTAC
CTGCGTCTGC AAGGCGCGGA CTTCGCACGC CGCTATCCGA AGATTGCATC GCGGCTCGCG
TTGCACGGCA CGGAATCGCT CGACCCGCAC ACGGAGCGGC TGATCGAAGC GACGGCGTTT
CTCGCTGCTC GCGTGCACCG CGATCTCGAT CAGGAATTCC CGCAGGTCGC GTCAGCGCTG
CTCGACAACG TGTGTCCCTC GCTCGTACAA CCCGTGCCAT CGATGACCGT CGCGCAGTTC
GATCTCGATC CGACTCAGGG CAAAGTGACG GCGGGTTTTC TGGTGCCGCG TCACACCGGA
CTGCAGGCGC GCACGGAAAC AGGCGATACG TGCCGCTTCC GCAGTGCATG GGACGCGGTG
CTGTGGCCGC TGAAGATCAG TCATGCCGCA TTCGGTGACG ATGCGACGCT GCGGCTCACG
CTTGAGTGCG CGCCGGGCGT CGACTTTTCC GAGCTGGAAC TGAAGCAACT ACGCATTCAC
CTCCACGGCG ACTGGATGGT CACGATGCCG CTCTATGAAT TGCTGGTGTC GGGTGTTGCG
GACGTGTCGG TGCGGCCCGA AGGCCGTCCG TCGGCGTCGC TGCTGCCAGC GCGTGCGTGG
CGCGAAGTCG GGTATGCGCA AGCCGACGAT GTGCTGCCGC GCCCACCCAA TGCACAGCCG
GCCTATTCGC TGATGCAGGA ATACTTCGCC TTCCCGCGCA AGTTCCATTT CTTCGATCTT
CATCACCTGG AAGGCCGGCT AGGATCGGGG CGCCGCTGCG AAGTCGTGTT TCATCTTGAC
CGTTCGCCGC GCGGCCTCGG CATGCTGCGC GCTGAACATT TTCAGCTTGG CTGCACGCCC
ATTGTCAATC TGTTCTCGCA GACGAGCGAG CCGATCGTCA TCGACCATCG GCACTATGAA
TACCGGCTCG TCGCCGATCA TCGCCGCGAG TCGATGACGG AAATCCATTC GGTTGCATCC
GTCGTCGCGT CGGACCCGTC GACCGATCGC GTTGAGCACG TGCCGTGCTT TTCCGCGATC
GATCATGTTC ACACGGACGG CAACACCGTT TTCTGGTCGG CGCGACGCGA ACACAGCCTG
CGCGAAAACG TCCATGGAAC GGACACGTTC CTGAGTTTCG TCAATGCCGC CAACACGCAA
AGCGATCCCG GCACGCCCGT CATTTACGCG AACGTGCTGT GCACGAACCG CCGGCTTGCG
GAACAGGTGC CCGTGGGCGC GCGCATGCTG CTCGAAAAGG TGTCGCAGAA CACCCGTGTT
CGCTGCCTTT ACGAACCGAC AGCGCAGCGC AGTCCTTCGC TCGGTAGCGA GACCTTGTGG
CGGCTGATTT CGCTGCTCAC GCTCAACTAT CACTCGCTGG TGAGCGGCGC GACGGGACGC
GCGCAATTGC AGGAGATGCT GCGGCTTTTC GCGTCCGAGA GCACGCGCGA GCAGGACCAG
ATTCGCGGCA TCCGCAGTGT AGAAGCGCGC AGCGTCACCG CGCACGTCGG CAGCGACGCG
TGGCGCGGCT ATTGCCGCGG CACCGAAGTC GCGGTCGAGT TCGACCCGGA GACCTTCGTC
GGCGGTTCGC CTTTGCTGCT GGGCGCCGTG CTCGCGCGTT TCTTTGCGAT GTACACGTCG
GTCAATTCAT TTGTACGGCT GGTGGTGCGC CGTGGAGACG AGACATGGAA GCAATGGGAG
CCGATGACGG GCTGCCAGCA GTTGCTCTGA
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| Protein sequence | MKADMAPDDI LQYYKRELSY LRLQGADFAR RYPKIASRLA LHGTESLDPH TERLIEATAF
LAARVHRDLD QEFPQVASAL LDNVCPSLVQ PVPSMTVAQF DLDPTQGKVT AGFLVPRHTG
LQARTETGDT CRFRSAWDAV LWPLKISHAA FGDDATLRLT LECAPGVDFS ELELKQLRIH
LHGDWMVTMP LYELLVSGVA DVSVRPEGRP SASLLPARAW REVGYAQADD VLPRPPNAQP
AYSLMQEYFA FPRKFHFFDL HHLEGRLGSG RRCEVVFHLD RSPRGLGMLR AEHFQLGCTP
IVNLFSQTSE PIVIDHRHYE YRLVADHRRE SMTEIHSVAS VVASDPSTDR VEHVPCFSAI
DHVHTDGNTV FWSARREHSL RENVHGTDTF LSFVNAANTQ SDPGTPVIYA NVLCTNRRLA
EQVPVGARML LEKVSQNTRV RCLYEPTAQR SPSLGSETLW RLISLLTLNY HSLVSGATGR
AQLQEMLRLF ASESTREQDQ IRGIRSVEAR SVTAHVGSDA WRGYCRGTEV AVEFDPETFV
GGSPLLLGAV LARFFAMYTS VNSFVRLVVR RGDETWKQWE PMTGCQQLL
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