Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5967 |
Symbol | |
ID | 6247539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 495879 |
End bp | 497696 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642597675 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001862077 |
Protein GI | 186470759 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.142305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATATCG ACAAGTCTGC GCGCATTCAC CGCTATCCGC TCTACGCGAA AGTCTGCTTG CTGCTTGCCT GCATCGTCGC CCTGATCACC GTGCTTTACC TGGGCGCGTT CATGCAGACA AGAGGAAGCG AAGGCTTCCG GCAGACGCTG TTCTCGCTCG ACGAAGCCAT GCGGCTGGAC CGCAAGGCCG CGAGCCTGCA AACGGCTTCG CCCGACACCG CGCGTGCATT GAGGGAACTG GCCGACTCGC TTGTCAGCAA CGATACGCTA CTGACGGACT GGAGGCAACG CGGCGCGCCG ACGCCGGAAA TCGGCGGCGC GCTGGCGGCC GCGAATGCGT CGGCTGCGCC GGAGCACACG GGCAAACCGG ATGCAAAGCT CGCGGCGCTC GGCGCGTTGC GCGCGCACGT GGCGTATCAG CGCGAGGTGC ACGCCGCCGT GCTCGGACTG TTGCAAGCCT GCACCGTGTG CCTGCTGATC TTCGGCGTGG TGTCGCTCGC ATGGGGCGCA CGCCGCACGC TCGTTGCACG GCCGCGTGCG GCATTGCAGG CGCTCGTCGA AACGGGGCTG AGCGTGCCGC AAGGCCGCGA CGAAATCGAG CGCCTGCTGA AGCTTCAGGC CGAGCTCGCC GTGCGGCTTC GCACGGAGCA GGACGAGTCC GTGCGGCTCA AGCGCATCGT CGAAGACTAT ATTACGTTCG CCGACCAGTC ACTCGAGCTG CTGCATCACA TCTGCGCCCA GCTCGCCGAA GAAGAACCGT CCGGCCGCAC GCTCGAAGCG CTGCTGCAAC GTCTGGTCGG CGTGCTGCGC GCGCAGCGCA TCGCGCTGGT GGTCACGGAA TCGACGGCAC AGCTGCTCGA CATCGATCCC GTCGTCGCAC CCAATGGCGA TGTGCCCGCC ATCGTGCGCT CACGCGTGAC GAACGAGCTG ATGACGCTGG CAGGCACGCA TACCTTCCCG CCGCTCGATA ACGGCGAGGT GCCGCCGCCC GTGCTGGCCG CGCCCGTGCG CGTGCCGCTC GCGAGCTACG GTGTGCTGAT CGCGGAGGGC GAGCCGGAGA CGCGCTTCGA ACTGCGCCAC CTATATCTGA TCGAGACCAT CGCGAGCGTG CTCGCGCACG CGATCTCCAA TCTCAGCCGC GACGTGCGCG ACCGGCGCAT GGCGCTGTTC GAAGAACGCA ATGCGATCGC GCGTGAACTG CACGACTCGC TCGCGCAATC GCTGTCGTAC ATGAAGATAC AGCTGGCTCG CCTGCAGGCC GTGCTGCCGC CCGAACTGTC GCAGTCCGAC ATCGCCGAAA TCGCACGCGG CATTCGCGAA GGCATCGACA GCGCTTACCG GCAGTTGCGC GAACTGCTCA CCACCTTCCG TTCGCCGATG CACGCGCATG GCCTCGCATC CACGCTGGAA GAACTTGCCG AGGAATTTGG CTCGCGCAGC GAAGTGCAGA TCTCGATCGA CAACCGTGTG CCGCGCATGC GTCTGTCCGT CAACGAGGAA ATGCACGTCG CGCAGATCGT GCGCGAGGCG CTGACCAATG TGCTTCGCCA TGCGCGCGCC ACCACGGCTC AGGTGCAGCT GATGTCGGAC GGCCGCACGA TGACCGTATC GATCGACGAC GACGGCCGCG GCATCAATCG CACAGAAGGC GACGAACACC ACTACGGCCT GTCGATCATG CGCGAGCGCG CCCGCAGCCT GGGCGGACGG CTCGAAGTGA AGCCGGCCGA ACGGGGCTCC CGCGTGGTGC TGACGTTCGT CCCCACCGCG CTCGCCGCGT ACAAGGCGCG CGCGACGAGC GGGGCCGGCA TGCGCTAG
|
Protein sequence | MNIDKSARIH RYPLYAKVCL LLACIVALIT VLYLGAFMQT RGSEGFRQTL FSLDEAMRLD RKAASLQTAS PDTARALREL ADSLVSNDTL LTDWRQRGAP TPEIGGALAA ANASAAPEHT GKPDAKLAAL GALRAHVAYQ REVHAAVLGL LQACTVCLLI FGVVSLAWGA RRTLVARPRA ALQALVETGL SVPQGRDEIE RLLKLQAELA VRLRTEQDES VRLKRIVEDY ITFADQSLEL LHHICAQLAE EEPSGRTLEA LLQRLVGVLR AQRIALVVTE STAQLLDIDP VVAPNGDVPA IVRSRVTNEL MTLAGTHTFP PLDNGEVPPP VLAAPVRVPL ASYGVLIAEG EPETRFELRH LYLIETIASV LAHAISNLSR DVRDRRMALF EERNAIAREL HDSLAQSLSY MKIQLARLQA VLPPELSQSD IAEIARGIRE GIDSAYRQLR ELLTTFRSPM HAHGLASTLE ELAEEFGSRS EVQISIDNRV PRMRLSVNEE MHVAQIVREA LTNVLRHARA TTAQVQLMSD GRTMTVSIDD DGRGINRTEG DEHHYGLSIM RERARSLGGR LEVKPAERGS RVVLTFVPTA LAAYKARATS GAGMR
|
| |