Gene Bphy_5960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5960 
Symbol 
ID6247532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp486102 
End bp488294 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content64% 
IMG OID642597668 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001862070 
Protein GI186470752 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0518214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCG ATCCCCGTCA TGACGTGCTG TTCCAACCGA TCCAGATTGG CCCCAAGACC 
CTGCGCAACC GCTTCTATCA GGTTCCGCAC TGCATCGGCG CAGGCAGCAA CCTGCCGGGC
TTTCAGGCCG CCCACCGCTC GATGAAAGCC GAAGGCGGCT GGGGCGCAAT GAATACCGAG
TACTGCTCGA TCCACCCCGA GTCGGACGAC ACGCATCGTC TCTCAGCGCG CATCTGGGAC
GAAGGTGACG TGCGCAATCT GCGCGCGATG ACGGAGGAGG TTCACAAATA CGGCGCGCTG
GCAGGCATCG AAATGTGGTA CGGCGGCGCG CACGCACCGT GCATGGAAAG CCGCGCGACG
CCTCGCGGCC CGAGCCAGTA CGCGTCCGAG TTCGAGACCT TGACGTATTG CAAGGAGATG
GATCTCGACG ACATTCGCGA CGTGCAGCAG TTCTACGTCG ATGCCGCGCT GCGGGCCCGC
GACGCCGGCT TCGATATCGT CTATGTGTAC GGCGCGCACT CGTATCTGCC GCTCCAGTTC
CTTTCGCCGT ACTACAACAA GCGCACCGAC GGCTACGGCG GCTCGCTCGA GAACCGCGCG
CGTTTCTGGC TCGAAACGCT GGAAAAAGTG CGCCGCGCCG TGGGCAGCGA CTGCGCGATC
GCAACGCGCT TCGCCGTCGA TTCGCTGTAC GGCAGCGGCG GCATCGAAGT CGAGAAGGAC
GGCATGAAGT TCGTCGAGAT GGCCGATTCG CTCGTCGACC TGTGGGACGT CGATGTCGGC
GACATCGCCG AATGGGGTGA AGACGCGGGC CCGTCGCGCT TCTATCTGCA AGGGCATCAG
GTGCCGTGGA CGCGCTTCAT CAAGGAAGTG TCCAGGAAGC CCGTGCTCGG CGTCGGCCGT
TTCACCGACC CGGAGAAGAT GACGGAGATC GTCACCAAGG GCATTGCCGA CATCATCGGC
GCGGCGCGTC CGTCGATTGC CGATCCGTTC CTGCCGAAGA AGATCGACGA AGGCCGCGTC
GACGATATCC GCGTGTGCAT CGGCTGCAAC GTGTGCATCT CGCGCTGGGA GATCGGCGGC
CCGCCGATGA TCTGCACGCA GAACGCGACG GCCGGTGAAG AATACCGCCG CGGCTGGCAC
CCGGAAAAGT TCGCCGAATG CGGCTCGAAC GATTCGGTGC TGGTGGTCGG CGCGGGCCCG
TCGGGCTCGG AGTGCGCGCG CGTGCTGATG CAACGCGGCT ACACGGTGCA CCTCGTCGAT
CAGGCGGAGA AGATCGGCGG CCATCTGAAC AGCGTGGTCA CGCTGCCGGG CCTCGGCGAA
TGGGGCTATC ACCGCGACTA TCGCGAGACG CAGATCACGA AGCTGCTGAA GAAGAACCGT
CATAGCCAGC TTGCGCTCGG TCAGAAGCCG CTCACGGCCG ACGACGTGCT CGACTACGGC
GCGGAGAAAG TCGTGATCGC CACGGGCTCG CATTGGGTCG GCGACGGCAC CAACTGCCTG
ACGCACGATC CGATTCCGGG CGCAGACGCG TCGCAGCCCG ACCAACTGAC GCCCGAACAG
GTGCTGTCGG GCAAGAAGGC GATCGGCAAG CGCGTCGTGA TCCTGAATGC CGACACGTAC
TTTATGGCGC CGAGCCTCGC CGAAAAACTC GCGGCGGCCG GTCACGAAGT GACGATCGTG
AGCGGCGTGC ATCTCGCGAA CTACATGCAC TTCACGCTCG AGTATCCGAA CATGATGCGC
CGCCTGCACG AACTGGGCGT GCATGAACTC GGCGATCACT TCGCCAGCCG CATCGAGCCG
GGCCGCATCC AGATCTACAA CATCTGGGGC GACGGTTCGC GCCGCACGTA CAAGGGTGCT
GGCCAGTTGC CGCGCGACGA GAACAAGACC CACCGCTGGC TCGAGTTCGA TTCGCTCGTG
CTCGTGACGG CCCGCCGCTC GAACGACGGC CTGTACCGCG AACTGAAGCA GCGTGAAAGC
GAGTGGGACG GCAAGGGCAT CAAGGCCGTG TACCTGATCG GCGATGCCGA AGCACCGCGC
CTGATCGCCG ATGCAACCTT CACGGGCCAC CGCCTCGCAC GCGAGATCGA AGAGAAGAAC
GCCCAGTTTC CGCTGCCGTA CAAGCGCGAA GTGGCCGTGT GGGGCACGCC GCACAAACCC
GGCGGCACCT TCGAGATCGT CTACAAGAAG TAG
 
Protein sequence
MPRDPRHDVL FQPIQIGPKT LRNRFYQVPH CIGAGSNLPG FQAAHRSMKA EGGWGAMNTE 
YCSIHPESDD THRLSARIWD EGDVRNLRAM TEEVHKYGAL AGIEMWYGGA HAPCMESRAT
PRGPSQYASE FETLTYCKEM DLDDIRDVQQ FYVDAALRAR DAGFDIVYVY GAHSYLPLQF
LSPYYNKRTD GYGGSLENRA RFWLETLEKV RRAVGSDCAI ATRFAVDSLY GSGGIEVEKD
GMKFVEMADS LVDLWDVDVG DIAEWGEDAG PSRFYLQGHQ VPWTRFIKEV SRKPVLGVGR
FTDPEKMTEI VTKGIADIIG AARPSIADPF LPKKIDEGRV DDIRVCIGCN VCISRWEIGG
PPMICTQNAT AGEEYRRGWH PEKFAECGSN DSVLVVGAGP SGSECARVLM QRGYTVHLVD
QAEKIGGHLN SVVTLPGLGE WGYHRDYRET QITKLLKKNR HSQLALGQKP LTADDVLDYG
AEKVVIATGS HWVGDGTNCL THDPIPGADA SQPDQLTPEQ VLSGKKAIGK RVVILNADTY
FMAPSLAEKL AAAGHEVTIV SGVHLANYMH FTLEYPNMMR RLHELGVHEL GDHFASRIEP
GRIQIYNIWG DGSRRTYKGA GQLPRDENKT HRWLEFDSLV LVTARRSNDG LYRELKQRES
EWDGKGIKAV YLIGDAEAPR LIADATFTGH RLAREIEEKN AQFPLPYKRE VAVWGTPHKP
GGTFEIVYKK