Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5950 |
Symbol | |
ID | 6247522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 473317 |
End bp | 474288 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642597658 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001862060 |
Protein GI | 186470742 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00309473 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTCAACC TGCTTCGCAA TCTCACGCTG CGCCAGTTGC AGATCTTCGC GGCCGCCGCG CAATACGAGA GCTTCGCGCG CGCCGCGGAG GTGCTGCATC TGACGCAACC CGCGGTGTCG ATGCAGATCA AGCAGCTCGA AGAGGCGATC GAACTCGCGC TGTTCGAGCG CATCGGGCGT CGAATTGCGC TCACCGAGGC GGGCGCAACG CTGTCGCATC ACGCGAAGCG CATTCTTGGC GACATCAAGG ATGCCGAGAA TGCGATGCGC GCGCTCGCTT CGGCCGATGG CGGCACCGTG TCGATCGGTC TCGTCAGCAC GGCGCGCTAC TTCGTGCCGC GGCAGATTTC GCGCTATGCG GAGCGGCATC CGAAAGTCGA CATCCACTTT TCGATCGCCG AACGCGACAC GCTGCTTCGC CAGTTGCAGG ACAACGCAAT CGATCTCGCC GTGATGGGAC GCCCGTCCGT CGAACTCGAC GCGCACTGCG AGCCGCTCGC GTACAACCCG CATGTGATCG CCGCGAGCAC GTCACATCCA TTCGTCGATG CAGCGCGTTT CGACTTGCAC GAACTGCGCC ATGACACTTT TCTGATGCGC GAGCCGGCCT CCGACACGGC GGCCGTCGCC AACGAGATGT TCCAGCAGCA TCTGTTCAAG CCGGCCCGCA CGCTCGCGCT CGACAGCCAC GAGACCGTCA AGCAGGCGGT GGTCGCGGGC ATGGGCGTGA GCCTGCTGCC GCTGCATACG CTGCGGCTCG AGCTGCTCGC GCGCGAAATA GCGATCCTGC ACGTGAACGG CACGCCCATC GATCGCGTCT GGCACGTGGT CCATATGAAC GCGAAGCAGC TGTCGCCCGC CTGCGCGGCG TTCCGGCGCT TTCTGATCGA GAAGACGGGC GCGTGGCTCG AAGGCCAGTT CGCTGACCTC ACACCGACGG CTCAGGTCGC GAGTCCGTTC GTGCAGACAT GA
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Protein sequence | MLNLLRNLTL RQLQIFAAAA QYESFARAAE VLHLTQPAVS MQIKQLEEAI ELALFERIGR RIALTEAGAT LSHHAKRILG DIKDAENAMR ALASADGGTV SIGLVSTARY FVPRQISRYA ERHPKVDIHF SIAERDTLLR QLQDNAIDLA VMGRPSVELD AHCEPLAYNP HVIAASTSHP FVDAARFDLH ELRHDTFLMR EPASDTAAVA NEMFQQHLFK PARTLALDSH ETVKQAVVAG MGVSLLPLHT LRLELLAREI AILHVNGTPI DRVWHVVHMN AKQLSPACAA FRRFLIEKTG AWLEGQFADL TPTAQVASPF VQT
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