Gene Bphy_5939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5939 
Symbol 
ID6247511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp463101 
End bp463874 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID642597647 
Producthypothetical protein 
Protein accessionYP_001862049 
Protein GI186470731 
COG category[S] Function unknown 
COG ID[COG1891] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.471017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0147378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTA TGCTCGCCAG TGTGCGCAAT CTCGATGAGG CGCGCGACGC CGCCCGCGCC 
GGCGCCGATC TGATCGATCT GAAAGAGCCC GGCGCAGGTG CGCTCGGCGC GGTCTCCGCA
CCGCGCATCG CGCATATCGT GCAATCGCTG CGCGCCGGCT TTCCGCACCT GCCCATCAGC
GCGGCGATCG GAGACCTGCA GCCGGGCGAC GACGCGGGCC TCGAGTTTCG CGCAGCGCAG
GCGGGCCGTT GCGGCGTGGA CTATGTCAAG GCGGGTGTGC CGGCCGATGG CGGCTCGTTC
GATGTCGCGT GCCGAACGCT CGCGAGCATG CGCGAGCTTC AATGGAACAT GGTGCCCGTG
CTGCTGGTCG ACAACGGCCT CGATTTGCGG ATCGTCGACT ACGCGTCCGA GCTGCGCTTC
GCTGCCGTAA TGGTGGATAC GGCCACCAAG AAGCGCGGCA ATCTCTTTCA ATGCGTGCCG
CTCGCGGTGC TCGACCGTGT GGTGCAGATC GCGCGTTCGC ACAATGTGAT GGCGGGACTC
GCGGGCTCGC TGCTGAGCGG GCACGTACCG CTGATTCGCG CGCTCGGCCC CGATATCGCC
GGCTTCCGCA CGGCACTGTG CGACGGCTCG CGCACAGGGC GCCTCAATGC CGCGCGCGTG
CACGATCTGC GCGCGCGGCT GTCGTACCCA GCCCATACGC CAGGCGCGGC GAGCCCCGCC
GCCAACGATA CCGGCTTCGG CACCGTCGCA GTCGGTCAGT CCGTCGTCGC GTGA
 
Protein sequence
MIRMLASVRN LDEARDAARA GADLIDLKEP GAGALGAVSA PRIAHIVQSL RAGFPHLPIS 
AAIGDLQPGD DAGLEFRAAQ AGRCGVDYVK AGVPADGGSF DVACRTLASM RELQWNMVPV
LLVDNGLDLR IVDYASELRF AAVMVDTATK KRGNLFQCVP LAVLDRVVQI ARSHNVMAGL
AGSLLSGHVP LIRALGPDIA GFRTALCDGS RTGRLNAARV HDLRARLSYP AHTPGAASPA
ANDTGFGTVA VGQSVVA