Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5924 |
Symbol | |
ID | 6247496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 444466 |
End bp | 445443 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642597632 |
Product | citrate (pro-3S)-lyase |
Protein accession | YP_001862034 |
Protein GI | 186470716 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.333382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTCA CTGTCATCGA GCAGGCCAAA GCGCGGCTGC ATCGTTCCGA GCTGGCCGTG CCCGGCTCGA ATACCGCGAT GTTCGAGAAG GCCGCGCGCT CGGCTGCCGA CATCGTCTTT CTCGACTGCG AAGACGCCGT CGCGCCGGAC GACAAGGAGC AGGCGCGCAA GAACATCGTC GAGGGACTCA ACGAGATTGA CTGGGGCACC AAGACGATGA TGGTTCGCAT CAACGGTCTC GATACGCACT ACATGTATCG CGACGTCGTC GATATCGTCG AAGCTTGCCC GCGTCTGGAC ATGATCCTGA TTCCGAAGGT CGGCGTGGCC GCGGACGTGT ATGCCGTCGA CATGCTCGTC ACACAGATCG AAGCCGCGCG CCGGCGCACG AAGAAGATCG GCTTCGAAGT GCTGATCGAA ACCGCGCTCG GCATGGCGAA CGTCGAGCGC ATCGCGCAGT CGAGCCGCCG TCTGGAGGCG ATGTCGTTCG GCGTCGCGGA CTACGCGGCA TCGACGCGCG CGCGCACGAC GGTGATCGGC GGCGTCAATC GCGACTACGG CGTGCTCACT GACAAGAACG AGCGCGGCGA GCGCGACTAC TTCTGGGCAG ACCAATGGCA CGCTGCGCAA ACGCGGATGA TGGTAGCGTG CCGCGCGTAT GGGCTACGTC CCATCGACGG CCCGTTCGGC GATTTCAGCG ACCCCGATGG CTACGACGCC GCCGCGCGCC GCGCCGCTGT GCTGGGCTAT GAGGGCAAAT GGGCGATCCA CCCGTCGCAG ATCGAGCTCG CCAATCGGGT GTTCACGCCC GCTGAAGCCG AAGTCACGAA GGCACGCCGC ATCATGGACG CGATGGCTCA AGCCGCGAAG GAAGGCAAAG GCGCGGTTTC GCTGGATGGC CGGCTGATCG ACGCCGCGAG CATCCGTATG GCCGAGGCGC TGCTCGCGAC CGCGGATGCA ATCGGGAATA ACAGATAG
|
Protein sequence | MSFTVIEQAK ARLHRSELAV PGSNTAMFEK AARSAADIVF LDCEDAVAPD DKEQARKNIV EGLNEIDWGT KTMMVRINGL DTHYMYRDVV DIVEACPRLD MILIPKVGVA ADVYAVDMLV TQIEAARRRT KKIGFEVLIE TALGMANVER IAQSSRRLEA MSFGVADYAA STRARTTVIG GVNRDYGVLT DKNERGERDY FWADQWHAAQ TRMMVACRAY GLRPIDGPFG DFSDPDGYDA AARRAAVLGY EGKWAIHPSQ IELANRVFTP AEAEVTKARR IMDAMAQAAK EGKGAVSLDG RLIDAASIRM AEALLATADA IGNNR
|
| |