Gene Bphy_5920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5920 
Symbol 
ID6247492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp439932 
End bp440630 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID642597628 
Productglutamate synthase alpha subunit 
Protein accessionYP_001862030 
Protein GI186470712 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0070] Glutamate synthase domain 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.755435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.413716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTG TGAACTTCGA CCTGGCGTCT GCCTCGGTGA CGGACGTGAA CGGCTTCCTG 
CATCGAGAGG CCGCGAAAGC GGGCACGCGC CGCGTGCTGA TCTCGAATCC CGACGGTGCG
CACAACATCG CGGTGGGCAT CGATTGTCCC ATCGAAGTCG AGATCGACGG TCATGCCGGC
TATTACGCCG CCGGCATGAA CAAGGAGGCG AAAGTGACCA TCTCGGGCAG CGCCAGCACG
GGCGTGGCCG AGAACATGAT GAGCGGCCGC GTGCACGTGA AGGGCTTCGC ATCCAACGCG
GCGGGCGCGT CGGCGCACGG CGGGCTGCTC GTCATCGAAG GCGATGCGGG CCTGCGCTGC
GGCATCTCGC TCAAGGGCGC CGACATCGTC GTGAAGGGAT CGGTCGGCAG CTTCTCGGCG
TTCATGGCGC AGGCAGGCCG GATCGTGATT TGCGGCGATG CCGGCGATGC GCTCGGCGAT
TCGCTATACG AGGCGGTGAT CTATGTGCGC GGCAAGGTCA AGTCGCTCGG CGCCGATGCG
CGCGAAGAGC CGATGCAGCC CGCCGACGTG GAAGCCGTCG CGCAGTTGCT GCGCGCGGCG
GGCCCGGCCT TTGCGGAGAT CGATCCCAAG GAATTCAGGC GCGTTGCATC GGCCCGCTCG
CTGTATCACT GGAATGCCGA CGCGAATCAG GAATATTGA
 
Protein sequence
MDSVNFDLAS ASVTDVNGFL HREAAKAGTR RVLISNPDGA HNIAVGIDCP IEVEIDGHAG 
YYAAGMNKEA KVTISGSAST GVAENMMSGR VHVKGFASNA AGASAHGGLL VIEGDAGLRC
GISLKGADIV VKGSVGSFSA FMAQAGRIVI CGDAGDALGD SLYEAVIYVR GKVKSLGADA
REEPMQPADV EAVAQLLRAA GPAFAEIDPK EFRRVASARS LYHWNADANQ EY