Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_5917 |
Symbol | |
ID | 6247489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 436902 |
End bp | 437561 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642597625 |
Product | hypothetical protein |
Protein accession | YP_001862027 |
Protein GI | 186470709 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.449297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCAC CACTTCGAAT GAGCCCGATG TGCGATGCAT GGAAATCGCC CGGCCTGCGC TCGAGCGTGC GAGAAGGCAT GCGCGTCGAG GAACAGGTCG ATGCTGCCGA CACCGTGCGT GCGGCGACGC TCGGCATTGC CGACGTGTCG TTCCTGCCGC GAACCGGCTT CAAGGGCAAG GGCGCGGCGG CATGGCTGCA GGCACAGGAA ATCCCCGTGC CGGAGCAGCC GAACAGCTGG GCCCCGCTTG CGGGCGGCGG CGTGGTCCTG CGGCTCGGCC TCTCCGAGTA CCTGATCGAA GACGGCCTGA CGCAAGGCAG TTCGGCCAGG ATGGCTCACC TGGACACGCC CGTGCATGTT TATCCCGTGC TGCATCAGGA CGTCGCGCTC GTGTTGTGCG GCGACGCCGT GCACGAGCTG CTGCTGCAAA CCTGCAATGT CAATTTCGCC GCCCTCGATC CGGCGGGCCG GCCAGTCGTG CTGACTTCGA TGGCGGGCGT CGCCGTCACC GTCATGCCGG GCGTCCGGGC GGGTAGGCCT TACTACCGGA TATGGGCCGA CGGCACCTAC GGCCTGTATC TGTGGGAAAG CCTTGCCGGC ATCGCTCGCG AGCTGGGTGG CGGCCCTGTC GGGGTCGCCG CGATCACGGA GATCGACTAG
|
Protein sequence | MNAPLRMSPM CDAWKSPGLR SSVREGMRVE EQVDAADTVR AATLGIADVS FLPRTGFKGK GAAAWLQAQE IPVPEQPNSW APLAGGGVVL RLGLSEYLIE DGLTQGSSAR MAHLDTPVHV YPVLHQDVAL VLCGDAVHEL LLQTCNVNFA ALDPAGRPVV LTSMAGVAVT VMPGVRAGRP YYRIWADGTY GLYLWESLAG IARELGGGPV GVAAITEID
|
| |