Gene Bphy_5903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5903 
Symbol 
ID6247475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp423660 
End bp424715 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID642597611 
ProductABC transporter related 
Protein accessionYP_001862013 
Protein GI186470695 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.333383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTGC CGGCATCAAC CGTGGTTCAT GCGAGCCCAG CCGACATCGA GCTCGTGCAC 
GTCTCGAAGC GCTATGGCGA TTCGCTCGCG GTCGACGCAA TCGACCTGCG CATTCCAGGC
GGTGCTTACT GCTGCCTGCT CGGCCCGTCG GGTTGCGGCA AGACCTCGAC CTTGCGCATG
ATCGCGGGTC ACGAGTGGGT TTCCGAAGGC GATGTGCTGA TTGGCGGGCG CAATGTCACG
CGCGAACAAC CCGCCGGGCG CGGCACGGCG ATGGTGTTTC AAAGCTACGC GCTGTTTCCA
CATCTGTCCG CGCTCGACAA CGTCGCGTTC AGTCTCAAGA TGCGCGGCGT CGCCAAAGAG
GCGCGACGAA AGCGCGCGGG CGAACTGCTC GAACTCGTCG CGATGTCCGC CTACGCACAG
CGCAGGCCTG CCCAGCTCTC GGGCGGCCAG CAGCAACGCG TGGCGCTTGC GCGCGCATTG
CTCAACGAAC CCCGCTGCCT CCTGCTCGAC GAACCGCTGT CGGCGGTCGA TCCGTTCCTG
CGCGTGCAGA TGCGCACCGA ACTCAAGCGC TGGCAAAAAG AACTCGGGAT CACATTCGTG
CACGTCACGC ATTCTCAGGA AGAAGCGATG GCGCTCGCAG ATCTCGTGGT GGTGATGAGC
GACGGTCATA TCGAACAGAG CGGCACGCCG TTCGACGTGT TCAACCGCCC GCGTACTGAA
TTCGTCGCAC GCTTTCTCGG CAGCCATAAC GTGCTCGGCG CGAACGGCAC GCTCTTCACC
GTGCGCGCCG ACCGTCTGCG CATCGCGCCG CAAGGCGTCG CGCCCGGCAC GAGTGCGGGC
GAAGGCGGCT TGAGCCGGAT CGGCGGGCTC GCCTGCACCG TGCGCGAAGC CGAGTATCAA
GGCACGCATC TGCGCATCAC GCTCGACCCG CTAGACGGCT CGCCCGCGCT GGTCTCCCTG
ATGAGCGACG CCGACTATGA CCCGCAACGT CTCGGACCCG ATGCACGCGT GACCGTCTGG
TGGGATGAAC AAAGCGCCCA TCCGCTCGCG GCATGA
 
Protein sequence
MVLPASTVVH ASPADIELVH VSKRYGDSLA VDAIDLRIPG GAYCCLLGPS GCGKTSTLRM 
IAGHEWVSEG DVLIGGRNVT REQPAGRGTA MVFQSYALFP HLSALDNVAF SLKMRGVAKE
ARRKRAGELL ELVAMSAYAQ RRPAQLSGGQ QQRVALARAL LNEPRCLLLD EPLSAVDPFL
RVQMRTELKR WQKELGITFV HVTHSQEEAM ALADLVVVMS DGHIEQSGTP FDVFNRPRTE
FVARFLGSHN VLGANGTLFT VRADRLRIAP QGVAPGTSAG EGGLSRIGGL ACTVREAEYQ
GTHLRITLDP LDGSPALVSL MSDADYDPQR LGPDARVTVW WDEQSAHPLA A