Gene Bphy_5880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5880 
Symbol 
ID6247452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp397443 
End bp398783 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content64% 
IMG OID642597588 
Productcitrate transporter 
Protein accessionYP_001861990 
Protein GI186470672 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT GGCAGATCTA TCTAGTGGTC GGTGTGTTTT CGGTGGTCAT CCTCGTGATC 
GCCTTCGACG TGATCGACAT GGCCGTAGCC GCGCTCGTCG GCGCGAGCGC ACTGATCGCG
CTGGGCATTC TGGAAGAAAA GGATTTGCTG GCCACAGCGC GCACATCGGC GGGTCCAATC
AGCCTGCTGT TCGGCGGCAT GATCGTCGCG CGGATCCTCT CGACCACGGG CCTGTTCGAT
CTGGTCGGCG ACTTCTATCT CAGGGCGACG GCGGGCAGCG GCAAGCGCTT CCTGCTTCTG
CTGATCGTAA TCGTCGCGCC TTTGTGCGCT CTGCTTCCCA ACGCGACAAC GGTGATCCTG
CTTGCACCCA TCATCGTTCG CGTGGCGCGG GCGCTCGACA TCGACATCGT CCCGCCGCTG
ATCCTCACCG CGATCCTCAG CAATGCCGCC GGCCTGCTGA CGCTGGTCGG CGACCCCGCG
ACCTTCCTCG TGGGCAGTTC CATCGGCATG ACGTTCGGCG AATATCTCAG GCGCGCGAGC
CTCGGCGGCG TGCTCGCGAT CCTCGTGGCG ATCCCGTTGC TGCCCGTGAT GATGCCCGGC
ATCTGGCGGA TGGCGAGGCC GTTGCCGCCG CGTACAGCGC GAGCGCAACT GAAGCGGCCC
GTCTACGCCG TGTTCGCGCT GGTCGTCCTG ATGCTCATGA TGGTGCTCTT TGTGATGGGC
GAAGACCTGC CGACGCGCAT CGTCCCGCCC GTGGTGGCCG TTATCGCCAG CGCGCTCGCG
TTACTGGTGG CCTTCGCCTT CAAGGTCGAG CCGACCGAAA ACGTACTGCG CGACGTCGAC
TGGAAGACAC TCCTGTTCCT GTCGTGCATT TTTTGCCTCG TGCAAGGCAT GGCAAAGACG
GGCCTTCTGG AGGTCATGTC GGTCAAGCTG TATGAAGTGT TCGGGACGCG CCTGACGCTC
GTTGCACTTG CGATGATCTT CGGCATCGGC GTGCTGTCTT CCGTGCTCGC GAACGTGCCC
GTCGCGGCGG CGTCGATCGT GATGGTCAAG GGGTATCTCG TCACGGCCGA ATTCGTTCCT
GACGCCGCGC TATCGGATCA GTTCACGCAG TGGCCGCCTG CCGTCATCCC TGTTTTCGTC
GGCATGATGT ACGGCGCGAC GCTGGGCGGC AACGCGACGC TCGTCGGCTC CGCGGCCAAT
ATCGTCGCTG CCGGGATCTG TGCGCGGGAG GGCACACCCG TCAGCTTCGG ACGGTTTCTG
CGCTATGGAT TGCCCGTCAC CGCCTGCCAG CTCGCGGTCG CGGCCGGCTA TCTGGTCGTG
CTGACGAAAG TGCTGCATTG A
 
Protein sequence
MSDWQIYLVV GVFSVVILVI AFDVIDMAVA ALVGASALIA LGILEEKDLL ATARTSAGPI 
SLLFGGMIVA RILSTTGLFD LVGDFYLRAT AGSGKRFLLL LIVIVAPLCA LLPNATTVIL
LAPIIVRVAR ALDIDIVPPL ILTAILSNAA GLLTLVGDPA TFLVGSSIGM TFGEYLRRAS
LGGVLAILVA IPLLPVMMPG IWRMARPLPP RTARAQLKRP VYAVFALVVL MLMMVLFVMG
EDLPTRIVPP VVAVIASALA LLVAFAFKVE PTENVLRDVD WKTLLFLSCI FCLVQGMAKT
GLLEVMSVKL YEVFGTRLTL VALAMIFGIG VLSSVLANVP VAAASIVMVK GYLVTAEFVP
DAALSDQFTQ WPPAVIPVFV GMMYGATLGG NATLVGSAAN IVAAGICARE GTPVSFGRFL
RYGLPVTACQ LAVAAGYLVV LTKVLH