Gene Bphy_5875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5875 
Symbol 
ID6247447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp392815 
End bp393564 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID642597583 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001861985 
Protein GI186470667 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA AGAATCAAGT GGTCATCATC ACGGGCGCGG CATCGGCGCG CGGTATCGGC 
AAGGCGACGG CCAAAGCGAT GGCCGCGCGA GGCGCCCGCG TCGCGATCCT CGACCTCAAG
CAGGCCGACG CCGAAAGCGC CGCGCGTGAC CTCGGGGACG GCCACCTGGG CCTTGCTTGC
GACGTCACCG ACAAGGCTGC ATGCGTCGCC GCCGCCAATG CCGTCATCGA CACATACGGT
CGCATCGATG TGCTGGTGAA TAACGCGGGC ATCACGCAGC CCATCAAGAC GCTGGAGATC
GCGCGCGAAA ATTTCGACGC GGTGATTGGC GTCAGCCTGC TCGGCACGCT TTACATGTCG
CAAGCGGTCA TCCCCTGGAT GAAGAAGCAG CAAAGCGGCA GCATCGTATG CATGTCCTCC
GTCTCCGCAC AACGCGGCGG CGGCATCTTT GGCGGCCCGC ACTATAGCGC AGCAAAAGCG
GGCGTGCTCG GTCTTGCCAA GGCCATGGCG CGCGAGTTCG GCGCCGATCG CATCCGCGTG
AATTCGATCA CGCCGGGTCT CATCCAGACT GACATCACAG GCGACAAGCT GACGCCGGAA
ATGCGTGCCG ACATCATCAA GGGCATTCCG CTTGGACGTC TCGGCGAAGC GAACGATATC
GCCAACGCCT GCGTCTTCCT GGCAAGCGAC TTGTCGACAT ATCTCACGGG CATCACGCTC
GATGTCAACG GCGGCATGCT GATTCACTGA
 
Protein sequence
MLLKNQVVII TGAASARGIG KATAKAMAAR GARVAILDLK QADAESAARD LGDGHLGLAC 
DVTDKAACVA AANAVIDTYG RIDVLVNNAG ITQPIKTLEI ARENFDAVIG VSLLGTLYMS
QAVIPWMKKQ QSGSIVCMSS VSAQRGGGIF GGPHYSAAKA GVLGLAKAMA REFGADRIRV
NSITPGLIQT DITGDKLTPE MRADIIKGIP LGRLGEANDI ANACVFLASD LSTYLTGITL
DVNGGMLIH