Gene Bphy_5861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5861 
Symbol 
ID6247433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp371602 
End bp373881 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content65% 
IMG OID642597569 
Productfilamentous haemagglutinin outer membrane protein 
Protein accessionYP_001861971 
Protein GI186470653 
COG category 
COG ID 
TIGRFAM ID[TIGR01901] filamentous haemagglutinin family N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.29882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAG ATCAACGGCT GGTATCGCAC GCTTGTGACG TCCGACGCAA TTCGAATGCG 
CGTTCGCTCT GCGCTCACTC GTTCCACCCG ATCAACACGT TGCGCGTTGC CGCGCTGCTG
GCGCTTTGCT GCGCGGCATC CGCACACGCT GGCGGACTGC TGCCCGCGGG CGGGCGATTC
GTCGGCGGCA GCGGGTCGAT CGCCACAAAC GGATCGACGC TAACCGTCAA TCAATCGACA
GGACGCGCGG TCGTTAACTG GGACAGCTTC TCTATCGGCA ACGGCAACCA GGTTGTGTTC
GCCAACGGCA GCGGCGCGAC GCTCAACCGC GTCACGGGTG GCAAGGCATC GGCCATCCTG
GGCGCACTCA CGGCCAGCGG CAGCGTGTAC CTGATCAATC CGCAAGGCAT CGTCGTGGGT
CCGCGGGGCG TGATCGCCAC CAACGGACGC TTTGTTGCGT CCACACTCGA CGCCGATCCC
GCCGCCTTCA TGAAAGGCGG CCCGCTTGCG CTTGCGGGCA ATTCGAATGC AAGCATCGTC
AACCTCGGCA AGATCGCCTC GAATGGCGGC GACGTCTTTC TGATCGCGCG CAGCGCGATC
ATGAACGACG GCATGATCAG CGCACCCAAT GGAACCGTGG AACTTGCCGT GGCGAAGCAG
GTATTGCTGC AGGATTCGTC GACGGGCAGG CAGGTGTTGG TGCAGTCCGG CGCGGGCGGC
ACGCTCGCCA ACACGGGCGC TATCCAGGCG GCGCAGATCA GCCTGCAAGC CGTGGATGGC
AACATCTACG CGCTAGCAGG CAATCACGAG GCCATTCGCG CGACGGGCAC GGCCACGCGT
GACGGCCATG TGTGGCTCGT TGCCGAGCAA GGCACCATGC GGCCGGGCGG CGTCATCGGC
GCATCCGGCG GCACCGTCGA CATGAACGCG AAGACGCTCG CGTTTCCCCA AGGCGGCACG
ACGGTGGACG CAAAACAATG GAACCTCTCC GCCCCGACAT TCACTGTCGA CCAGATGGCA
GCAAACGCGC TTTCGCAAGG GCTCGGCCAC GGCACATCGG TCAAGGTGCA AACGACGGGC
GCGAACAGCA GCGGCGGCGA CCTCAACGTC GATTCCGGCA TCCACTGGCA AGGAGGCGCG
TCGCTGACGC TTGCCGCGTA CCACACGTTG ACGCTCGGCT CCGATGCGAC GCTCGCCAAT
CAGGGTAACG GCAACCTGAC ACTGCGCGCC GACGCCGCCA GTCTCGACAA TGCGGGCGCG
GTCGTGAATC ACGGCGCAAT TGACTGGTCG CGCAGCACGG GCATTGTCAA CGTGCTATAC
GACATGAACG GCGCCTACAG TGGGGGCACG CTGCTTGGCA ATCCCGCATG GAAATCCGCG
CCTTCGAGCG GCCAGCTCAC GCAGATCACC GGCTATAAGC TGGTCAACAA CGTGAACGAT
CTGGAGAACA TCAGGCAAGA CCTGGCGGGC AATTACGCGC TCGGTGCCGA CATCGATGCT
GCGGCGCATG TGTTTGCGCC GATCGGCAAC CATACGACGC CGTTCACGGG GCAGTTCGAC
GGCATGTGGC ACACCGTTTC CAATGCCACC ATCAACATCG ACGATTTCAG CAAGGACTAC
TCGTCGGGAC TGTTCGGCGT GGTGGGATCA GCGGGCGTGC TGCGCGATGT CGGTATCGAG
AACGGCTTCG TGTCGACAAG CAACCAGGGC AGCGGCATCC TCGCCGGCGT CAACCGGGGC
GTCATTGCAT ACGCGCATAC CTCGGGACGT GCAGGCGAAG TCGAGCAGAA CGGTACGGAC
TTCGGCGGGC TCGTCGGCAG AAACGAAGGC ACAGTCGAAC GCTCGTGGAG CAGCGCGACG
GTCTCCGGCT CCGATGCGAA CGGCGGACTG GTCGGCTACA ACCTCGGCAC GATTTTGCAG
TCGTATGCAA CGGGTGCGGT GAGTCCCGTC TTCTCTACGG GTTCCGGCGG CGGACTCGTG
GGCATCAACG AGGGAACGGT CAGCCAGTCG TTCGCGACGG GTGCCGTGCA GACGCGCTCG
ATGCCGACGC ATGGCGTGAT CGCGTTCGGT TCCGGCACGC TCGCACCCGA CGTCTACTGG
AACCGGGAGA CATCGGGGCA AAGCGTGAGC GGCGGCGACC TGCCGCCCGC GAACGGCCTG
ACCACCGCGC AGATGAGCGA TCCCGCGAGC TTCGTGGGCT ACGACTTCGG ACCGAACGGC
GCCTGGCTCA TGCCCGCGGG CGCCACGCAT CCTGTATTGA GGCTACCCGC CGCTCACTAG
 
Protein sequence
MITDQRLVSH ACDVRRNSNA RSLCAHSFHP INTLRVAALL ALCCAASAHA GGLLPAGGRF 
VGGSGSIATN GSTLTVNQST GRAVVNWDSF SIGNGNQVVF ANGSGATLNR VTGGKASAIL
GALTASGSVY LINPQGIVVG PRGVIATNGR FVASTLDADP AAFMKGGPLA LAGNSNASIV
NLGKIASNGG DVFLIARSAI MNDGMISAPN GTVELAVAKQ VLLQDSSTGR QVLVQSGAGG
TLANTGAIQA AQISLQAVDG NIYALAGNHE AIRATGTATR DGHVWLVAEQ GTMRPGGVIG
ASGGTVDMNA KTLAFPQGGT TVDAKQWNLS APTFTVDQMA ANALSQGLGH GTSVKVQTTG
ANSSGGDLNV DSGIHWQGGA SLTLAAYHTL TLGSDATLAN QGNGNLTLRA DAASLDNAGA
VVNHGAIDWS RSTGIVNVLY DMNGAYSGGT LLGNPAWKSA PSSGQLTQIT GYKLVNNVND
LENIRQDLAG NYALGADIDA AAHVFAPIGN HTTPFTGQFD GMWHTVSNAT INIDDFSKDY
SSGLFGVVGS AGVLRDVGIE NGFVSTSNQG SGILAGVNRG VIAYAHTSGR AGEVEQNGTD
FGGLVGRNEG TVERSWSSAT VSGSDANGGL VGYNLGTILQ SYATGAVSPV FSTGSGGGLV
GINEGTVSQS FATGAVQTRS MPTHGVIAFG SGTLAPDVYW NRETSGQSVS GGDLPPANGL
TTAQMSDPAS FVGYDFGPNG AWLMPAGATH PVLRLPAAH