Gene Bphy_5859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5859 
Symbol 
ID6247431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp368469 
End bp369587 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content60% 
IMG OID642597567 
Productputative transmembrane protein 
Protein accessionYP_001861969 
Protein GI186470651 
COG category[S] Function unknown 
COG ID[COG4655] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0264309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGAA TGAGCAAACA AAAACAGCGA GGCTCCGTCG CGGTGATCAC GGCCGTGAGC 
ATGGTGTCGC TTCTGGGGTT GGCGGCGCTG GCGATCGACA TCGGCAATCT GCTGGTGTCG
CGCAACGAAT TGCAGAATGC GGCTGACGCT GCCGCGCTCG CAGGTGCGCC TTGCCTGTAT
CAGCGTGCGC AGTGCGGCAA TACGACGGCA ACCGAGCCCG ACTGGACGAC GGCTACGCAG
AAGGCGTCCA GCTTTGCAAC GGCCTCGACG TCGAACACGG TGCAGGGGAG TGTGATCAAG
GTGGCGCAGA CAGGGTCGGG CTACTGGAAC ATAACGGGTA GCCCGGGCAC CCTGGAGACT
GTGCCGTTCA CACCCGGTAC GAACGATCTG CCCGCCATCC AGGTGACGAT CACCAAGAGC
GCCGCCAATG CGAACGGCAG TGTTCCCGTC TATCTCGCAA GCATCCTTGG CGTGACGTCG
CTCTCGGCGA GCGCAACGGC GACAGCGGCC GTGTCGAGAC CTGGCTACGT CGGCCCCGGC
GGACTTTTTC CGCTCGCGAT GTCCAAGTGT CTATTCGACA ACTACTGGGA CTCGTCGACC
AACTCGCCGA AGCTGGCCAC GAGTACGGCA AAGATCCCCG GACAGGACTT TAACCAGACA
CCCAACACGC CATACATCTT TCAGGTCTCG TCGTCGTATC AGGTTAACGG TTGCGAAGCA
GGGCAGTGGA CTACGCTGAC CAGTCAGCAA AACAACGTTA CGTTCGTGCG GGGACTGATT
GCAGGTCAGA ATACCGATTC GCTCGGCATC GGGTCGCAGC CTGGAACCTA CATCCAGCCT
GGCGAGGAGA ATACGCTCTA CACGGCTGTC AACGATTGCA GTGCTGCCGG AGACCATACC
TGTGAATACG AGACGGTGCC TGTCGTCAGC AGCCTTGGGA CTGGCAGCTA TCAGCCCGTC
GTTGCCTTTG CTTGCGTGCA TGTTCTCGGT GCGAAGAAAG GCTCCAGCCC GTATGTCATT
TTGCAGATGA GCAATCAGCC GGACAAGTGC CAGGCCAAGA ACGCCGGCGG CGTCGGGCCG
AACTATGGGG CGATAACACC GCCGCGTCTG GTTCAATGA
 
Protein sequence
MHGMSKQKQR GSVAVITAVS MVSLLGLAAL AIDIGNLLVS RNELQNAADA AALAGAPCLY 
QRAQCGNTTA TEPDWTTATQ KASSFATAST SNTVQGSVIK VAQTGSGYWN ITGSPGTLET
VPFTPGTNDL PAIQVTITKS AANANGSVPV YLASILGVTS LSASATATAA VSRPGYVGPG
GLFPLAMSKC LFDNYWDSST NSPKLATSTA KIPGQDFNQT PNTPYIFQVS SSYQVNGCEA
GQWTTLTSQQ NNVTFVRGLI AGQNTDSLGI GSQPGTYIQP GEENTLYTAV NDCSAAGDHT
CEYETVPVVS SLGTGSYQPV VAFACVHVLG AKKGSSPYVI LQMSNQPDKC QAKNAGGVGP
NYGAITPPRL VQ