| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5840 |
|---|
| Symbol | |
|---|
| ID | 6247413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 348791 |
|---|
| End bp | 349276 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642597549 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_001861951 |
|---|
| Protein GI | 186470633 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGT CTGCGACTCT CCAGGGGTGC CTTACGGACA AGGGCTCCCG TTATGAAATC
GTGCGTCATC CATACAGCCA TTCGAGCATG GAAACGGCGG CCGCCGCGCA TGTCCCCGGC
GACCGACTGG CGAAGACCGT GCTCTTCGAG GACGAGCAGG GCTATGTCGC TGCTGTGCTG
TCGTCCACCC ACGCCGTGCG CCTCGCCGAG CTATCGTCGA AAACGGGACG GCACCTCTCG
CTCGCGAAGG AAGGGGACTT GCGCGAACTG TTCAAAGATT GCGAATACGG CGCGCTGCCG
CCCGTTTGCA CGGCGTACGG CATGAAAACG TATCTGGACG AGAGCCTCGT GCGTCAACCT
GATGTGTATT TCGAATCCGG TGATCACGAA GCGCTCGTGC ATATGGATGG CGAACAGTTT
CTCGCGCTGA TGGACGGCGC CGAGCGCGCG CATTTCGGGC GGCGGATGCA AGGCATGTCG
GTCTGA
|
|---|
| Protein sequence | MSMSATLQGC LTDKGSRYEI VRHPYSHSSM ETAAAAHVPG DRLAKTVLFE DEQGYVAAVL
SSTHAVRLAE LSSKTGRHLS LAKEGDLREL FKDCEYGALP PVCTAYGMKT YLDESLVRQP
DVYFESGDHE ALVHMDGEQF LALMDGAERA HFGRRMQGMS V
|
|---|
| |