Gene Bphy_5827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5827 
Symbol 
ID6247401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp335110 
End bp335487 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content59% 
IMG OID642597537 
Productcytochrome o ubiquinol oxidase subunit IV 
Protein accessionYP_001861939 
Protein GI186470621 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.652974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA CATCTGAATT GAGACAGGCG CACGCCCACG ATGCGTCGCA TGGCAGCGTG 
AAGCACTATG TGATCGGTAT GCTCCTGTCG CTGGCGCTGA CGTTTGCATC GTTCGGCGTG
GTCATGACAC ATGTCGTGCC GCGCGCGATG GGACTCACGG CCGTAGTCGC GCTGTGCGTC
GTGCAACTGC TGGTACAGCT GCGGTACTTC CTGCACCTGG GTTCGTCGGC GGATCAGCGC
TCCAACACGG GGATTTTCGT GTGTACCGCG TTGCTGATCG CGATCATCGT CGCGGGTTCG
CTGTGGGTGA TTCACAACGC GAACGTGAAC ATGATGCCAA CACAGATTTC AGTCGAGCGT
GCGTTGGCGC GCGATTGA
 
Protein sequence
MSQTSELRQA HAHDASHGSV KHYVIGMLLS LALTFASFGV VMTHVVPRAM GLTAVVALCV 
VQLLVQLRYF LHLGSSADQR SNTGIFVCTA LLIAIIVAGS LWVIHNANVN MMPTQISVER
ALARD