| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5822 |
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| Symbol | |
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| ID | 6247396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 328864 |
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| End bp | 329610 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642597532 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001861934 |
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| Protein GI | 186470616 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.245983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC TTGCAGGTAA GGTCGCTGTC GTCACGGGCG CTTCGAAGGG CATCGGTGCG
GGCATCGCGA AGGCGCTCGC GGCGGAAGGC GCTTCCGTGG TGGTCAACTA CTCGAGCAGC
AAAGCTGCTG CCGATGCGGT CGTGGCTGAC ATTACGGCGG CAAAGGGCAA GGCGATTGCG
GTCGGCGGCG ATGTGTCGAA GGCTGCGGAT GCGCAGGGCA TCATCCATGC AGCCGTCGAA
ACGTATGGCC GCATCGACAT CCTGGTGAAC AATTCAGGCG TCTACGAATT CGCGCCGATC
GAAGAATTCA CGGAAGATCA ATTCCACCGC CAGTTCAATA TCAATGTGCT AGGTCTGCTG
CTGACGACGC AAGCCGCCGT CAAGCACCTT GGCGAAGGCG CGAGCATCAT CAACATCAGT
TCGGTGGTGA CGAGCATCAC GCCGCCGACG ACGGCCATCT ACAGCGGCAC GAAAGGCGCT
GTCGACGCGA TCACGGGCGT GCTGTCGCGC GAACTGGGAC CGAAGAAGAT TCGCGTGAAC
GCAATCAATC CGGGCATCGT GATTACGGAA GGCACGCACG AAGCGGGCAT CGCCGGCTCC
GACTTCGAAA CGATGGCCGT GAGCCAGACG CCTCTTGGCC GTGTGGGCCA GCCGAGCGAC
ATCGCGTCGA TTGCGGTGTT CCTCGCCTCC GACGACTCGG GCTGGCTGAC GGGCGAAACC
ATCGTCGCAA GCGGCGGGAT GCGCTGA
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| Protein sequence | MSKLAGKVAV VTGASKGIGA GIAKALAAEG ASVVVNYSSS KAAADAVVAD ITAAKGKAIA
VGGDVSKAAD AQGIIHAAVE TYGRIDILVN NSGVYEFAPI EEFTEDQFHR QFNINVLGLL
LTTQAAVKHL GEGASIINIS SVVTSITPPT TAIYSGTKGA VDAITGVLSR ELGPKKIRVN
AINPGIVITE GTHEAGIAGS DFETMAVSQT PLGRVGQPSD IASIAVFLAS DDSGWLTGET
IVASGGMR
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